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Who We Fund: Publication Detail

Project Title: DNA PROTEIN CROSS-LINKS:CELLULAR EFFECTS AND REPAIR MECHANISMS
PI: Tretyakova, Natalia Y
Institution: University Of Minnesota
Grant Number: R01ES023350

These search results have not been confirmed by NIEHS and are therefore, not official. They are to be used only for general information and to inform the public and grantees on the breadth of research funded by NIEHS.

Viewing 28 publications
Export to Excel (http://www.niehs.nih.gov//portfolio/index.cfm/portfolio/grantpubdetail/grant_number/R01ES023350/format/excel)
Publication Title Authors Grant Number(s) Journal (Pub date) PubMed Link Pub Year
DNA-protein crosslinks are repaired via homologous recombination in mammalian mitochondria.   Chesner, Lisa N; Essawy, Maram; Warner, Cecilia; Campbell, Colin R01ES023350 DNA Repair (Amst) (2021 Jan) 33316746 Exiting the NIEHS site 2021 
Cross-linking of the DNA repair protein O6-alkylguanine DNA alkyltransferase to DNA in the presence ...   Ming, Xun; Michaelson-Richie, Erin D; Groehler 4th, Arnold S; Villalta, Peter W; Campbell, Coli ... R01ES023350 DNA Repair (Amst) (2020 05) 32283495 Exiting the NIEHS site 2020 
Translesion synthesis of 6-nitrochrysene-derived 2'-deoxyadenosine adduct in human cells.   Powell, Brent V; Bacurio, Jan Henric T; Basu, Ashis K R01ES023350 DNA Repair (Amst) (2020 11) 32721818 Exiting the NIEHS site 2020 
5-Formylcytosine-induced DNA-peptide cross-links reduce transcription efficiency, but do not cause t ...   Ji, Shaofei; Park, Daeyoon; Kropachev, Konstantin; Kolbanovskiy, Marina; Fu, Iwen; Broyde, Sus ... R01ES023350, R01ES025987 J Biol Chem (2019 11 29) 31597704 Exiting the NIEHS site 2019 
Error-prone replication of a 5-formylcytosine-mediated DNA-peptide cross-link in human cells.   Naldiga, Spandana; Ji, Shaofei; Thomforde, Jenna; Nicolae, Claudia M; Lee, Marietta; Zhang, Zh ... R01ES023350, R01ES026184 J Biol Chem (2019 07 05) 31138652 Exiting the NIEHS site 2019 
Transcriptional Bypass of DNA-Protein and DNA-Peptide Conjugates by T7 RNA Polymerase.   Ji, Shaofei; Thomforde, Jenna; Rogers, Colette; Fu, Iwen; Broyde, Suse; Tretyakova, Natalia Y R01ES023350, R01ES025987 ACS Chem Biol (2019 12 20) 31573793 Exiting the NIEHS site 2019 
5-Formylcytosine mediated DNA-protein cross-links block DNA replication and induce mutations in huma ...   Ji, Shaofei; Fu, Iwen; Naldiga, Spandana; Shao, Hongzhao; Basu, Ashis K; Broyde, Suse; Tretyak ... R01ES023350, R01ES025987 Nucleic Acids Res (2018 07 27) 29905846 Exiting the NIEHS site 2018 
A quantitative PCR-based assay reveals that nucleotide excision repair plays a predominant role in t ...   Chesner, Lisa N; Campbell, Colin R01ES023350 DNA Repair (Amst) (2018 02) 29413806 Exiting the NIEHS site 2018 
DNA Damage, Mutagenesis and Cancer.   Basu, Ashis K R01ES023350 Int J Mol Sci (2018 Mar 23) 29570697 Exiting the NIEHS site 2018 
Histone tails decrease N7-methyl-2'-deoxyguanosine depurination and yield DNA-protein cross-links in ...   Yang, Kun; Park, Daeyoon; Tretyakova, Natalia Y; Greenberg, Marc M R01ES023350 Proc Natl Acad Sci U S A (2018 11 27) 30429328 Exiting the NIEHS site 2018 
Site-specific cross-linking of proteins to DNA via a new bioorthogonal approach employing oxime liga ...   Pujari, Suresh S; Zhang, Yi; Ji, Shaofei; Distefano, Mark D; Tretyakova, Natalia Y R01ES023350 Chem Commun (Camb) (2018 Jun 14) 29851420 Exiting the NIEHS site 2018 
Cellular Repair of DNA-DNA Cross-Links Induced by 1,2,3,4-Diepoxybutane.   Chesner, Lisa N; Degner, Amanda; Sangaraju, Dewakar; Yomtoubian, Shira; Wickramaratne, Susith; ... R01ES023350 Int J Mol Sci (2017 May 18) 28524082 Exiting the NIEHS site 2017 
Chemical Biology of N5-Substituted Formamidopyrimidine DNA Adducts.   Pujari, Suresh S; Tretyakova, Natalia R01ES023350 Chem Res Toxicol (2017 01 17) 27959490 Exiting the NIEHS site 2017 
Controlling the Graphene-Bio Interface: Dispersions in Animal Sera for Enhanced Stability and Reduce ...   Pattammattel, Ajith; Pande, Paritosh; Kuttappan, Deepa; Puglia, Megan; Basu, Ashis K; Amalaradj ... R01ES023350 Langmuir (2017 12 12) 29144756 Exiting the NIEHS site 2017 
Mass Spectrometry Based Proteomics Study of Cisplatin-Induced DNA-Protein Cross-Linking in Human Fib ...   Ming, Xun; Groehler 4th, Arnold; Michaelson-Richie, Erin D; Villalta, Peter W; Campbell, Colin; ... R01ES023350 Chem Res Toxicol (2017 04 17) 28282121 Exiting the NIEHS site 2017 
Mass Spectrometry-Based Tools to Characterize DNA-Protein Cross-Linking by Bis-Electrophiles.   Groehler 4th, Arnold; Degner, Amanda; Tretyakova, Natalia Y R01ES023350 Basic Clin Pharmacol Toxicol (2017 Sep) 28032943 Exiting the NIEHS site 2017 
Mutagenicity of a Model DNA-Peptide Cross-Link in Human Cells: Roles of Translesion Synthesis DNA Po ...   Pande, Paritosh; Ji, Shaofei; Mukherjee, Shivam; Schärer, Orlando D; Tretyakova, Natalia Y; Bas ... R01ES023350 Chem Res Toxicol (2017 Feb 20) 27951635 Exiting the NIEHS site 2017 
Nanoarmoring: strategies for preparation of multi-catalytic enzyme polymer conjugates and enhancemen ...   Zore, Omkar V; Pande, Paritosh; Okifo, Oghenenyerovwo; Basu, Ashis K; Kasi, Rajeswari M; Kumar, ... R01ES023350 RSC Adv (2017) 29403641 Exiting the NIEHS site 2017 
Reversible DNA-Protein Cross-Linking at Epigenetic DNA Marks.   Ji, Shaofei; Shao, Hongzhao; Han, Qiyuan; Seiler, Christopher L; Tretyakova, Natalia Y R01ES023350 Angew Chem Int Ed Engl (2017 11 06) 28898504 Exiting the NIEHS site 2017 
Translesion Synthesis of 2'-Deoxyguanosine Lesions by Eukaryotic DNA Polymerases.   Basu, Ashis K; Pande, Paritosh; Bose, Arindam R01ES021762, R01ES023350 Chem Res Toxicol (2017 01 17) 27760288 Exiting the NIEHS site 2017 
Ultrathin Graphene-Protein Supercapacitors for Miniaturized Bioelectronics.   Mosa, Islam M; Pattammattel, Ajith; Kadimisetty, Karteek; Pande, Paritosh; El-Kady, Maher F; Bi ... R01ES023350 Adv Energy Mater (2017 Sep 06) 29104523 Exiting the NIEHS site 2017 
Bypass of DNA-Protein Cross-links Conjugated to the 7-Deazaguanine Position of DNA by Translesion Sy ...   Wickramaratne, Susith; Ji, Shaofei; Mukherjee, Shivam; Su, Yan; Pence, Matthew G; Lior-Hoffmann ... R01ES010546, R01ES023350, R01ES025987 J Biol Chem (2016 Nov 04) 27621316 Exiting the NIEHS site 2016 
Comparative Error-Free and Error-Prone Translesion Synthesis of N(2)-2'-Deoxyguanosine Adducts Forme ...   Bose, Arindam; Surugihalli, Chaitra; Pande, Paritosh; Champeil, Elise; Basu, Ashis K R01ES023350 Chem Res Toxicol (2016 05 16) 27082015 Exiting the NIEHS site 2016 
Covalent DNA-Protein Cross-Linking by Phosphoramide Mustard and Nornitrogen Mustard in Human Cells.   Groehler 4th, Arnold; Villalta, Peter W; Campbell, Colin; Tretyakova, Natalia R01ES023350 Chem Res Toxicol (2016 Feb 15) 26692166 Exiting the NIEHS site 2016 
DNA-Protein Cross-Links: Formation, Structural Identities, and Biological Outcomes.   Tretyakova, Natalia Y; Groehler 4th, Arnold; Ji, Shaofei R01ES023350 Acc Chem Res (2015 Jun 16) 26032357 Exiting the NIEHS site 2015 
Error-prone translesion synthesis past DNA-peptide cross-links conjugated to the major groove of DNA ...   Wickramaratne, Susith; Boldry, Emily J; Buehler, Charles; Wang, Yen-Chih; Distefano, Mark D; Tr ... R01ES023350 J Biol Chem (2015 Jan 09) 25391658 Exiting the NIEHS site 2015 
Synthesis of DNA Oligodeoxynucleotides Containing Site-Specific 1,3-Butadiene-Deoxyadenosine Lesions ...   Wickramaratne, Susith; Seiler, Christopher L; Tretyakova, Natalia Y R01ES023350 Curr Protoc Nucleic Acid Chem (2015 Jun 03) 26344227 Exiting the NIEHS site 2015 
Replicative bypass of abasic site in Escherichia coli and human cells: similarities and differences.   Weerasooriya, Savithri; Jasti, Vijay P; Basu, Ashis K R01ES021762, R01ES023350 PLoS One (2014) 25226389 Exiting the NIEHS site 2014 
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