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Title: Genetic identification of a common collagen disease in puerto ricans via identity-by-descent mapping in a health system.

Authors: Belbin, Gillian Morven; Odgis, Jacqueline; Sorokin, Elena P; Yee, Muh-Ching; Kohli, Sumita; Glicksberg, Benjamin S; Gignoux, Christopher R; Wojcik, Genevieve L; Van Vleck, Tielman; Jeff, Janina M; Linderman, Michael; Schurmann, Claudia; Ruderfer, Douglas; Cai, Xiaoqiang; Merkelson, Amanda; Justice, Anne E; Young, Kristin L; Graff, Misa; North, Kari E; Peters, Ulrike; James, Regina; Hindorff, Lucia; Kornreich, Ruth; Edelmann, Lisa; Gottesman, Omri; Stahl, Eli Ea; Cho, Judy H; Loos, Ruth Jf; Bottinger, Erwin P; Nadkarni, Girish N; Abul-Husn, Noura S; Kenny, Eimear E

Published In Elife, (2017 09 12)

Abstract: Achieving confidence in the causality of a disease locus is a complex task that often requires supporting data from both statistical genetics and clinical genomics. Here we describe a combined approach to identify and characterize a genetic disorder that leverages distantly related patients in a health system and population-scale mapping. We utilize genomic data to uncover components of distant pedigrees, in the absence of recorded pedigree information, in the multi-ethnic BioMe biobank in New York City. By linking to medical records, we discover a locus associated with both elevated genetic relatedness and extreme short stature. We link the gene, COL27A1, with a little-known genetic disease, previously thought to be rare and recessive. We demonstrate that disease manifests in both heterozygotes and homozygotes, indicating a common collagen disorder impacting up to 2% of individuals of Puerto Rican ancestry, leading to a better understanding of the continuum of complex and Mendelian disease.

PubMed ID: 28895531 Exiting the NIEHS site

MeSH Terms: Adolescent; Adult; Aged; Child; Collagen Diseases/epidemiology*; Collagen Diseases/genetics*; Female; Fibrillar Collagens/genetics*; Genotype; Heterozygote; Hispanic Americans; Homozygote; Humans; Male; Middle Aged; Molecular Epidemiology*; Multigene Family; Musculoskeletal Diseases/epidemiology; Musculoskeletal Diseases/genetics; New York City/epidemiology; New York City/ethnology; Pedigree*; Whole Genome Sequencing; Young Adult

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