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Who We Fund: Publication Detail

Project Title: GENOME-WIDE ANALYSIS OF THE FORMATION AND MUTAGENESIS OF ATYPICAL UV PHOTOPRODUCTS IN SKIN CANCER
PI: Wyrick, John J
Institution: Washington State University
Grant Number: R01ES032814

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Viewing 17 publications
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Publication Title Authors Grant Number(s) Journal (Pub date) PubMed Link Pub Year
Analysis of cytosine deamination events in excision repair sequencing reads reveals mechanisms of in ...   Morledge-Hampton, Benjamin; Kalyanaraman, Ananth; Wyrick, John J R01ES028698, R01ES032814 Nucleic Acids Res (2024 Feb 28) 38109317 Exiting the NIEHS site 2024 
DNA Repair in Nucleosomes: Insights from Histone Modifications and Mutants.   Selvam, Kathiresan; Wyrick, John J; Parra, Michael A R01ES028698, R01ES032814, R21ES035139 Int J Mol Sci (2024 Apr 16) 38673978 Exiting the NIEHS site 2024 
Genome-wide impact of cytosine methylation and DNA sequence context on UV-induced CPD formation.   Wilson, Hannah E; Wyrick, John J R01ES028698, R01ES032814, R21ES035139 Environ Mol Mutagen (2024 Apr) 37554110 Exiting the NIEHS site 2024 
A half century of exploring DNA excision repair in chromatin.   Smerdon, Michael J; Wyrick, John J; Delaney, Sarah R01ES028698, R01ES032814, R21ES035139 J Biol Chem (2023 Sep) 37527775 Exiting the NIEHS site 2023 
Contributions of replicative and translesion DNA polymerases to mutagenic bypass of canonical and at ...   Vandenberg, Brittany N; Laughery, Marian F; Cordero, Cameron; Plummer, Dalton; Mitchell, Debra; ... R01ES032814 Nat Commun (2023 May 04) 37142570 Exiting the NIEHS site 2023 
Detecting recurrent passenger mutations in melanoma by targeted UV damage sequencing.   Selvam, Kathiresan; Sivapragasam, Smitha; Poon, Gregory M K; Wyrick, John J R01ES028698, R01ES032814, R21ES035139 Nat Commun (2023 May 11) 37169747 Exiting the NIEHS site 2023 
Genome-wide maps of rare and atypical UV photoproducts reveal distinct patterns of damage formation ...   Bohm, Kaitlynne A; Morledge-Hampton, Benjamin; Stevison, Scott; Mao, Peng; Roberts, Steven A; W ... R01ES028698, R01ES032814 Proc Natl Acad Sci U S A (2023 Mar 07) 36853943 Exiting the NIEHS site 2023 
Genome-wide maps of UVA and UVB mutagenesis in yeast reveal distinct causative lesions and mutationa ...   Laughery, Marian F; Plummer, Dalton A; Wilson, Hannah E; Vandenberg, Brittany N; Mitchell, Debr ... R01ES028698, R01ES032814 Genetics (2023 Jul 06) 37170598 Exiting the NIEHS site 2023 
Damage mapping techniques and the light they have shed on canonical and atypical UV photoproducts.   Bohm, Kaitlynne A; Wyrick, John J R01ES028698, R01ES032814 Front Genet (2022) 36704334 Exiting the NIEHS site 2022 
High-resolution mapping demonstrates inhibition of DNA excision repair by transcription factors.   Duan, Mingrui; Sivapragasam, Smitha; Antony, Jacob S; Ulibarri, Jenna; Hinz, John M; Poon, Gre ... R01ES028698, R01ES032814 Elife (2022 Mar 15) 35289750 Exiting the NIEHS site 2022 
Mapping atypical UV photoproducts in vitro and across the S. cerevisiae genome.   Bohm, Kaitlynne A; Sivapragasam, Smitha; Wyrick, John J R01ES028698, R01ES032814 STAR Protoc (2022 Mar 18) 35005641 Exiting the NIEHS site 2022 
Molecular mechanism of UV damage modulation in nucleosomes.   Stark, Bastian; Poon, Gregory M K; Wyrick, John J R01ES028698, R01ES032814 Comput Struct Biotechnol J (2022) 36212527 Exiting the NIEHS site 2022 
Set2 histone methyltransferase regulates transcription coupled-nucleotide excision repair in yeast.   Selvam, Kathiresan; Plummer, Dalton A; Mao, Peng; Wyrick, John J R01ES028698, R01ES032814 PLoS Genet (2022 Mar) 35263330 Exiting the NIEHS site 2022 
Tips, Tricks, and Potential Pitfalls of CRISPR Genome Editing in Saccharomyces cerevisiae.   Antony, Jacob S; Hinz, John M; Wyrick, John J R01ES028698, R01ES032814 Front Bioeng Biotechnol (2022) 35706506 Exiting the NIEHS site 2022 
CTCF binding modulates UV damage formation to promote mutation hot spots in melanoma.   Sivapragasam, Smitha; Stark, Bastian; Albrecht, Amanda V; Bohm, Kaitlynne A; Mao, Peng; Emehise ... R01ES028698, R01ES032814 EMBO J (2021 Oct 18) 34487363 Exiting the NIEHS site 2021 
CTCF puts a new twist on UV damage and repair in skin cancer.   Stark, Bastian; Poon, Gregory M K; Wyrick, John J R01ES028698, R01ES032814 Mol Cell Oncol (2021) 35419468 Exiting the NIEHS site 2021 
Mutperiod: Analysis of periodic mutation rates in nucleosomes.   Morledge-Hampton, Benjamin; Wyrick, John J R01ES028698, R01ES032814 Comput Struct Biotechnol J (2021) 34527191 Exiting the NIEHS site 2021 
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