Superfund Research Program

The Long-term Impacts of Early Life Exposure to Superfund Chemicals in Humans and Wildlife

Center Director: David H. Sherr
Grant Number: P42ES007381
Funding Period: 1995-2021

Program Links

Datasets

Total number of records: 78

Dataset Title	Data Types	Data Repository
Airborne polychlorinated biphenyl congener concentrations from New Bedford, MA, 2015-2016.	Environmental Science Data	PANGAEA
aryl hydrocarbon receptor repressor [Homo sapiens]	Protein Sequence	GenBank
Assessment of a highly multiplexed RNA sequencing platform and comparison to existing high-throughput gene expression profiling techniques	Gene Expression	Gene Expression Omnibus (GEO)
Assessment of a highly multiplexed RNA sequencing platform and comparison to existing high-throughput gene expression profiling techniques	Gene Expression	Gene Expression Omnibus (GEO)
Assessment of a highly multiplexed RNA sequencing platform and comparison to existing high-throughput gene expression profiling techniques	Gene Expression	Gene Expression Omnibus (GEO)
Caenorhabditis elegans as an environmental monitor using DNA microarray analysis.	Gene Expression	Gene Expression Omnibus (GEO)
Carassius auratus clone 1 CYP19b gene, promoter region and 5' untranslated region	Nucleotide Sequence	GenBank
Carassius auratus clone 1 cytochrome P450 aromatase (CYP19a) gene, promoter region and partial cds	Nucleotide Sequence	GenBank
Carassius auratus clone 2 CYP19b gene, promoter region and 5' untranslated region	Nucleotide Sequence	GenBank
Carassius auratus clone 2 cytochrome P450 aromatase (CYP19a) gene, promoter region and partial cds	Nucleotide Sequence	GenBank
Carassius auratus clone 3 cytochrome P450 aromatase (CYP19a) gene, promoter region and partial cds	Nucleotide Sequence	GenBank
Chrysemys picta estrogen receptor mRNA, complete cds	Nucleotide Sequence	GenBank
Complex modulation of androgen responsive gene expression by methoxyacetic acid	Gene Expression	Gene Expression Omnibus (GEO)
Complex modulation of androgen responsive gene expression by methoxyacetic acid	Gene Expression	ArrayExpress
Cyphoma gibbosum glutathione S-transferase class mu (GSTM1) mRNA, complete cds	Nucleotide Sequence	GenBank
Cyphoma gibbosum glutathione S-transferase class mu (GSTM2) mRNA, complete cds	Nucleotide Sequence	GenBank
Danio rerio aryl hydrocarbon receptor repressor 1 (ahrr1) mRNA, complete cds	Nucleotide Sequence	GenBank
Danio rerio aryl hydrocarbon receptor repressor 2 (ahrr2) mRNA, complete cds	Nucleotide Sequence	GenBank
Danio rerio brain cytochrome P450 aromatase (cyp19b) mRNA, complete cds	Nucleotide Sequence	GenBank
Danio rerio CYP1A mRNA for cytochrome P450 1A, complete cds	Nucleotide Sequence	GenBank
Danio rerio ovarian cytochrome P450 aromatase (cyp19a) mRNA, complete cds	Nucleotide Sequence	GenBank
Danio rerio pregnane X receptor mRNA, complete cds	Nucleotide Sequence	GenBank
Data from: The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish	Genotype/Phenotype	Dryad
Development of a Classification Taxonomy for Adipogenic Chemicals: A Novel Tool for Identifying Emerging Metabolic Health Threats	Gene Expression	Gene Expression Omnibus (GEO)
Drug Matrix Data - Affymetrix Arrays	Gene Expression	Gene Expression Omnibus (GEO)
estrogen receptor [Chrysemys picta]	Protein Sequence	GenBank
Fundulus heteroclitus		BioProject
Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA, AHR1*1 allele, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA, AHR1*1B allele, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA, AHR1*3C allele, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus aryl hydrocarbon receptor nuclear translocator 2 (ARNT2) mRNA, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus aryl hydrocarbon receptor repressor (AHRR) gene, partial cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus aryl hydrocarbon receptor repressor (AHRR) mRNA, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus cytochrome P450 2P1 (CYP2P1) mRNA, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus cytochrome P450 2P2 (CYP2P2) mRNA, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus cytochrome P450 2P3 (CYP2P3) mRNA, complete cds	Nucleotide Sequence	GenBank
Fundulus heteroclitus estrogen receptor alpha deletion variant 1 mRNA, partial cds, alternatively spliced	Nucleotide Sequence	GenBank
Fundulus heteroclitus estrogen receptor alpha deletion variant 2 mRNA, partial cds, alternatively spliced	Nucleotide Sequence	GenBank
Fundulus heteroclitus estrogen receptor alpha mRNA, complete cds, alternatively spliced	Nucleotide Sequence	GenBank
Fundulus heteroclitus Raw sequence reads	Genotype/Phenotype	BioProject
Gene expression throughout vertebrate embryogenesis	Gene Expression	ArrayExpress
Gene expression throughout vertebrate embryogenesis	Gene Expression	Gene Expression Omnibus (GEO)
Gene expression timecourse in zebrafish whole eye in response to optic nerve crush	Gene Expression	Gene Expression Omnibus (GEO)
Homo sapiens aryl hydrocarbon receptor repressor mRNA, complete cds	Nucleotide Sequence	GenBank
Identification and developmental expression of the full complement of cytochrome P450 genes in zebrafish	Gene Expression	Gene Expression Omnibus (GEO)
Impact of MAA on mouse Leydig cell gene expression (Mus musculus)	Gene Expression	Gene Expression Omnibus (GEO)
Microarray data from BM-MSCs exposed to DMSO, LG268, Rosi, TPhP, TBT, and MEHP	Gene Expression	Gene Expression Omnibus (GEO)
Microgadus tomcod pop-variant Hudson River aromatic hydrocarbon receptor (AHR2) gene, exons 8 through 10 and partial cds	Nucleotide Sequence	GenBank
Microgadus tomcod pop-variant Hudson River aromatic hydrocarbon receptor (AHR2) mRNA, complete cds	Nucleotide Sequence	GenBank
Microgadus tomcod pop-variant Miramichi River aromatic hydrocarbon receptor (AHR2) gene, exons 8 through 10 and partial cds	Nucleotide Sequence	GenBank
Microgadus tomcod pop-variant Miramichi River aromatic hydrocarbon receptor (AHR2) mRNA, complete cds	Nucleotide Sequence	GenBank
Microgadus tomcod pop-variant Shinnecock Bay aromatic hydrocarbon receptor (AHR2) gene, exons 8 through 10 and partial cds	Nucleotide Sequence	GenBank
Microgadus tomcod pop-variant Shinnecock Bay aromatic hydrocarbon receptor (AHR2) mRNA, complete cds	Nucleotide Sequence	GenBank
MicroRNA profiling in Atlantic killifish (Fundulus heteroclitus)	Gene Expression	Gene Expression Omnibus (GEO)
Mustelus canis aryl hydrocarbon receptor 1 (AHR1) mRNA, partial cds	Nucleotide Sequence	GenBank
Mustelus canis aryl hydrocarbon receptor 2 (AHR2) mRNA, partial cds	Nucleotide Sequence	GenBank
Petromyzon marinus aryl hydrocarbon receptor (AHR) mRNA, complete cds	Nucleotide Sequence	GenBank
Phalacrocorax carbo CYP1A4 mRNA for cytochrome P450 1A4, complete cds	Nucleotide Sequence	GenBank
Phalacrocorax carbo CYP1A5 mRNA for cytochrome P450 1A5, complete cds	Nucleotide Sequence	GenBank
Platichthys flesus aryl hydrocarbon receptor 2 (AHR2) mRNA, partial cds	Nucleotide Sequence	GenBank
Protopterus annectens mitochondrion, complete genome	Nucleotide Sequence	GenBank
Raja erinacea aryl hydrocarbon receptor (AHR) mRNA, partial cds	Nucleotide Sequence	GenBank
Sex-dependent and growth hormone (GH)-dependent gene expression	Gene Expression	Gene Expression Omnibus (GEO)
Sex-dependent and HNF4alpha-dependent Mouse Liver Gene Expression	Gene Expression	Gene Expression Omnibus (GEO)
Sex-dependent and STAT5a-dependent Liver Gene Expression	Gene Expression	Gene Expression Omnibus (GEO)
Sex-dependent and STAT5b-dependent Liver Gene Expression	Gene Expression	Gene Expression Omnibus (GEO)
Sex-dependent and STAT5b-dependent Liver Gene Expression	Gene Expression	ArrayExpress
Sex-dependent and strain-dependent gene liver gene expression	Gene Expression	Gene Expression Omnibus (GEO)
Sex-specific early growth hormone responses in mouse liver (Mus musculus)	Gene Expression	Gene Expression Omnibus (GEO)
Taxonomic clustering of trascriptomic profiles of 38 known and 4 suspected therapeutic and environmental adipogens.	Gene Expression	The Adipogen Project
The Carcinogenome Project_Breast Carcinogenicity_MCF10A Portal	Carcinogenicity	The Carcinogenome Project
The Carcinogenome Project_Liver Carcinogenicity_HEPG2 Portal	Carcinogenicity	The Carcinogenome Project
Transcription profiling of C. elegans used as an assay system for endocrine disruptors	Gene Expression	ArrayExpress
Transcriptomic assessment of PCB-resistance in Atlantic killifish (Fundulus heteroclitus) embryos from a marine Superfund site	Gene Expression	Gene Expression Omnibus (GEO)
Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site	Gene Expression	Gene Expression Omnibus (GEO)
Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site	Gene Expression	ArrayExpress
Unbiased, Genome-wide in vivo Mapping of Transcriptional Regulatory Elements Reveals Sex Differences in Chromatin Structure Associated with Sex-specific Liver Gene Expression	Gene Expression	ArrayExpress
Unbiased, Genome-wide in vivo Mapping of Transcriptional Regulatory Elements Reveals Sex Differences in Chromatin Structure Associated with Sex-specific Liver Gene Expression	Gene Expression	Gene Expression Omnibus (GEO)