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Viewing 67 publications
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| Publication Title | Authors | Grant Number(s) | Journal (Pub date) | PubMed Link | Pub Year |
|---|---|---|---|---|---|
| A new method for estimating the probability of causal relationships from observational data: Applica ... | Andrews, Bryan; Wongchokprasitti, Chirayu; Visweswaran, Shyam; Lakhani, Chirag M; Patel, Chirag ... | R01ES032470 | Artif Intell Med (2023 May) |
37100513
|
2023 |
| Advancing Computational Toxicology by Interpretable Machine Learning. | Jia, Xuelian; Wang, Tong; Zhu, Hao | R01ES031080, R35ES031709 | Environ Sci Technol (2023 May 24) |
37224004
|
2023 |
| AI in drug discovery: A wake-up call. | Urbina, Fabio; Lentzos, Filippa; Invernizzi, Cédric; Ekins, Sean | R43ES033855 | Drug Discov Today (2023 Jan) |
36270472
|
2023 |
| Air Pollution and Cardiovascular and Thromboembolic Events in Older Adults With High-Risk Conditions ... | Nethery, Rachel C; Josey, Kevin; Gandhi, Poonam; Kim, Jung Hyun; Visaria, Aayush; Bates, Benja ... | K01ES032458, R01ES032418, T32ES007142 | Am J Epidemiol (2023 Aug 04) |
37070398
|
2023 |
| Benchmark dose modeling for epidemiological dose-response assessment using prospective cohort studie ... | De Pretis, Francesco; Zhou, Yun; Xun, Pengcheng; Shao, Kan | K25ES030402, R42ES032642 | Risk Anal (2023 Jul 27) |
37496455
|
2023 |
| Beyond the cancer slope factor: Broad application of Bayesian and probabilistic approaches for cance ... | Jang, Suji; Shao, Kan; Chiu, Weihsueh A | P30ES029067, P42ES027704, R42ES032642 | Environ Int (2023 May) |
37182419
|
2023 |
| Comparing LD50/LC50 Machine Learning Models for Multiple Species. | Lane, Thomas R; Harris, Joshua; Urbina, Fabio; Ekins, Sean | R44ES031038 | J Chem Health Saf (2023 Mar 27) |
37457397
|
2023 |
| Echo of Neighbors: Privacy Amplification for Personalized Private Federated Learning with Shuffle Mo ... | Liu, Yixuan; Zhao, Suyun; Xiong, Li; Liu, Yuhan; Chen, Hong | R01ES033241 | Proc AAAI Conf Artif Intell (2023 Feb) |
37654624
|
2023 |
| Estimating a Causal Exposure Response Function with a Continuous Error-Prone Exposure: A Study of Fi ... | Josey, Kevin P; deSouza, Priyanka; Wu, Xiao; Braun, Danielle; Nethery, Rachel | K01ES032458, R01ES028033, R01ES030616, T32ES007142 | J Agric Biol Environ Stat (2023 Mar) |
37063643
|
2023 |
| Evaluation of Model-Based PM2.5 Estimates for Exposure Assessment during Wildfire Smoke Episodes in ... | Considine, Ellen M; Hao, Jiayuan; deSouza, Priyanka; Braun, Danielle; Reid, Colleen E; Nethery, ... | K01ES032458, T32ES007142 | Environ Sci Technol (2023 Feb 07) |
36693177
|
2023 |
| Harmonized US National Health and Nutrition Examination Survey 1988-2018 for high throughput exposom ... | Nguyen, Vy Kim; Middleton, Lauren Y M; Huang, Lei; Zhao, Neil; Verly, Eliseu; Kvasnicka, Jacob ... | R01ES032470 | medRxiv (2023 Feb 08) |
36798185
|
2023 |
| Integrated causal-predictive machine learning models for tropical cyclone epidemiology. | Nethery, Rachel C; Katz-Christy, Nina; Kioumourtzoglou, Marianthi-Anna; Parks, Robbie M; Schumac ... | K01ES032458, P30ES009089, R00ES033742, R00ES033742, R00ES033742, R01ES030616 | Biostatistics (2023 Apr 14) |
34962265
|
2023 |
| Integrating Concentration-Dependent Toxicity Data and Toxicokinetics To Inform Hepatotoxicity Respon ... | Russo, Daniel P; Aleksunes, Lauren M; Goyak, Katy; Qian, Hua; Zhu, Hao | P30ES005022, R01ES031080, R35ES031709 | Environ Sci Technol (2023 Aug 22) |
37566783
|
2023 |
| Integrating structure annotation and machine learning approaches to develop graphene toxicity models ... | Wang, Tong; Russo, Daniel P; Bitounis, Dimitrios; Demokritou, Philip; Jia, Xuelian; Huang, Hen ... | R01ES031080 | Carbon N Y (2023 Feb) |
36845527
|
2023 |
| Investigating Use of Low-Cost Sensors to Increase Accuracy and Equity of Real-Time Air Quality Infor ... | Considine, Ellen M; Braun, Danielle; Kamareddine, Leila; Nethery, Rachel C; deSouza, Priyanka | K01ES032458, T32ES007142 | Environ Sci Technol (2023 Jan 09) |
36623253
|
2023 |
| Machine learning approaches to predict age from accelerometer records of physical activity at bioban ... | Le Goallec, Alan; Collin, Sasha; Jabri, M'Hamed; Diai, Samuel; Vincent, Théo; Patel, Chirag J | R01ES032470 | PLOS Digit Health (2023 Jan) |
36812610
|
2023 |
| Mobile Source Benzene Regulations and Risk of Childhood and Young Adult Hematologic Cancers in Alask ... | Nethery, Rachel C; Vega, Sofia; Frazier, A Lindsay; Laden, Francine | K01ES032458 | Epidemiology (2023 May 01) |
36715968
|
2023 |
| National Projections for Clinical Implications of Race-Free Creatinine-Based GFR Estimating Equation ... | Diao, James A; Wu, Gloria J; Wang, Jason K; Kohane, Isaac S; Taylor, Herman A; Tighiouart, Hoc ... | R01ES032470 | J Am Soc Nephrol (2023 Feb 01) |
36368777
|
2023 |
| Prediction and stratification of longitudinal risk for chronic obstructive pulmonary disease across ... | He, Yixuan; Qian, David C; Diao, James A; Cho, Michael H; Silverman, Edwin K; Gusev, Alexander ... | R01ES032470 | medRxiv (2023 Apr 05) |
37066248
|
2023 |
| Preventing AI From Creating Biochemical Threats. | Urbina, Fabio; Lentzos, Filippa; Invernizzi, Cédric; Ekins, Sean | R43ES033855 | J Chem Inf Model (2023 Feb 13) |
36696568
|
2023 |
| Prioritization of COVID-19 risk factors in July 2020 and February 2021 in the UK. | Tangirala, Sivateja; Tierney, Braden T; Patel, Chirag J | R01ES032470 | Commun Med (Lond) (2023 Mar 30) |
36997659
|
2023 |
| Reply. | Claypool, Kajal; Long, Michelle T; Patel, Chirag J | R01ES032470 | Clin Gastroenterol Hepatol (2023 Jun) |
36087712
|
2023 |
| Retrospective cohort study investigating synergism of air pollution and corticosteroid exposure in p ... | Josey, Kevin; Nethery, Rachel; Visaria, Aayush; Bates, Benjamin; Gandhi, Poonam; Parthasarathi, ... | K01ES032458, T32ES007142 | BMJ Open (2023 Sep 13) |
37709308
|
2023 |
| Systematic comparisons between Lyme disease and post-treatment Lyme disease syndrome in the U.S. wit ... | Chung, Ming Kei; Caboni, Mariaelena; Strandwitz, Philip; D'Onofrio, Anthony; Lewis, Kim; Patel, ... | R01ES032470 | EBioMedicine (2023 Apr) |
36958992
|
2023 |
| The Effect of Historical Data-Based Informative Prior on Benchmark Dose Estimation of Toxicogenomics ... | Ji, Chao; Shao, Kan | R42ES032642 | Chem Res Toxicol (2023 Aug 21) |
37494567
|
2023 |
| Validation of Acetylcholinesterase Inhibition Machine Learning Models for Multiple Species. | Vignaux, Patricia A; Lane, Thomas R; Urbina, Fabio; Gerlach, Jacob; Puhl, Ana C; Snyder, Scott ... | R43ES033855 | Chem Res Toxicol (2023 Feb 20) |
36737043
|
2023 |
| Waist Circumference and Insulin Resistance Are the Most Predictive Metabolic Factors for Steatosis a ... | Claypool, Kajal; Long, Michelle T; Patel, Chirag J | R01ES032470 | Clin Gastroenterol Hepatol (2023 Jul) |
35671890
|
2023 |
| A computational system for Bayesian benchmark dose estimation of genomic data in BBMD. | Ji, Chao; Weissmann, Andrew; Shao, Kan | R42ES032642 | Environ Int (2022 Mar) |
35151117
|
2022 |
| Adverse childhood experiences, diabetes and associated conditions, preventive care practices and hea ... | Schüssler-Fiorenza Rose, Sophia Miryam; Snyder, Michael P; Slavich, George M | K08ES028825 | Prev Med (2022 Jul) |
35398366
|
2022 |
| Clinical laboratory tests associated with survival in patients with metastatic renal cell carcinoma: ... | Velaer, Kyla; Thomas, I-Chun; Yang, Jaden; Kapphahn, Kristopher; Metzner, Thomas J; Golla, Abh ... | R01ES032470 | Urol Oncol (2022 Jan) |
34580027
|
2022 |
| Dual Use of Artificial Intelligence-powered Drug Discovery. | Urbina, Fabio; Lentzos, Filippa; Invernizzi, Cédric; Ekins, Sean | R43ES033855 | Nat Mach Intell (2022 Mar) |
36211133
|
2022 |
| Exposome-wide ranking of modifiable risk factors for cardiometabolic disease traits. | Poveda, Alaitz; Pomares-Millan, Hugo; Chen, Yan; Kurbasic, Azra; Patel, Chirag J; Renström, Fr ... | R01ES032470 | Sci Rep (2022 Mar 08) |
35260745
|
2022 |
| Mechanism-driven modeling of chemical hepatotoxicity using structural alerts and an in vitro screeni ... | Jia, Xuelian; Wen, Xia; Russo, Daniel P; Aleksunes, Lauren M; Zhu, Hao | P30ES005022, R01ES031080, R35ES031709 | J Hazard Mater (2022 Aug 15) |
35739723
|
2022 |
| Precision environmental health monitoring by longitudinal exposome and multi-omics profiling. | Gao, Peng; Shen, Xiaotao; Zhang, Xinyue; Jiang, Chao; Zhang, Sai; Zhou, Xin; Schüssler-Fiorenz ... | K08ES028825 | Genome Res (2022 Jun) |
35667843
|
2022 |
| Predicting Prenatal Developmental Toxicity Based On the Combination of Chemical Structures and Biolo ... | Ciallella, Heather L; Russo, Daniel P; Sharma, Swati; Li, Yafan; Sloter, Eddie; Sweet, Len; Hu ... | R01ES031080, R35ES031709 | Environ Sci Technol (2022 May 03) |
35451820
|
2022 |
| Prevalence of Fatty Liver Disease is Driven by Prediabetes and Diabetes: US NHANES 2017-2018. | Claypool, Kajal; Patel, Chirag J | R01ES032470 | Clin Gastroenterol Hepatol (2022 Mar) |
33965575
|
2022 |
| Replacement per- and polyfluoroalkyl substances (PFAS) are potent modulators of lipogenic and drug m ... | Marques, Emily; Pfohl, Marisa; Wei, Wei; Tarantola, Giuseppe; Ford, Lucie; Amaeze, Ogochukwu; ... | P42ES027706, R01ES031080, R35ES031709 | Toxicol Appl Pharmacol (2022 May 01) |
35337807
|
2022 |
| Secular Trends in Prevalence of Heart Failure Diagnosis over 20 Years (from the US NHANES). | Siontis, George Cm; Bhatt, Deepak L; Patel, Chirag J | R01ES032470 | Am J Cardiol (2022 Jun 01) |
35361480
|
2022 |
| Shared exposure liability of type 2 diabetes and other chronic conditions in the UK Biobank. | He, Yixuan; Patel, Chirag J | R01ES032470 | Acta Diabetol (2022 Jun) |
35348899
|
2022 |
| Statistical implications of endogeneity induced by residential segregation in small-area modelling o ... | Nethery, Rachel C; Chen, Jarvis T; Krieger, Nancy; Waterman, Pamela D; Peterson, Emily; Waller, ... | K01ES032458, P30ES000002 | Am Stat (2022) |
35531350
|
2022 |
| Systematically assessing microbiome-disease associations identifies drivers of inconsistency in meta ... | Tierney, Braden T; Tan, Yingxuan; Yang, Zhen; Shui, Bing; Walker, Michaela J; Kent, Benjamin M ... | R01ES032470 | PLoS Biol (2022 Mar) |
35235560
|
2022 |
| Using deep learning to predict abdominal age from liver and pancreas magnetic resonance images. | Le Goallec, Alan; Diai, Samuel; Collin, Sasha; Prost, Jean-Baptiste; Vincent, Théo; Patel, Chi ... | R01ES032470 | Nat Commun (2022 Apr 13) |
35418184
|
2022 |
| Using Prior Toxicological Data to Support Dose-Response Assessment─Identifying Plausible Prior Distr ... | Shao, Kan; Ji, Chao; Chiu, Weihsueh A | P42ES027704, R42ES032642 | Environ Sci Technol (2022 Nov 15) |
36279400
|
2022 |
| CATMoS: Collaborative Acute Toxicity Modeling Suite. | Mansouri, Kamel; Karmaus, Agnes L; Fitzpatrick, Jeremy; Patlewicz, Grace; Pradeep, Prachi; Albe ... | P42ES016465, R01ES031080 | Environ Health Perspect (2021 04) |
33929906
|
2021 |
| Characterising the relationships between physiological indicators and all-cause mortality (NHANES): ... | Nguyen, Vy Kim; Colacino, Justin; Chung, Ming Kei; Goallec, Alan Le; Jolliet, Olivier; Patel, ... | P30ES017885, R01ES028802, R01ES028802, R01ES032470 | Lancet Healthy Longev (2021 10) |
34825242
|
2021 |
| Construction of a Virtual Opioid Bioprofile: A Data-Driven QSAR Modeling Study to Identify New Analg ... | Jia, Xuelian; Ciallella, Heather L; Russo, Daniel P; Zhao, Linlin; James, Morgan H; Zhu, Hao | P30ES005022, R01ES031080 | ACS Sustain Chem Eng (2021 Mar 15) |
34239782
|
2021 |
| Depression, health comorbidities, cognitive symptoms and their functional impact: Not just a geriatr ... | Schüssler-Fiorenza Rose, Sophia Miryam; Bott, Nicholas T; Heinemeyer, Erin E; Hantke, Nathan C; ... | K08ES028825 | J Psychiatr Res (2021 07) |
34087515
|
2021 |
| Differential impacts of COVID-19 lockdowns on PM across the United States. | Chen, Kevin L; Henneman, Lucas R F; Nethery, Rachel C | K01ES032458, T32ES007142 | Environ Adv (2021 Dec) |
34642672
|
2021 |
| Examining the robustness of observational associations to model, measurement and sampling uncertaint ... | Klau, Simon; Hoffmann, Sabine; Patel, Chirag J; Ioannidis, John Pa; Boulesteix, Anne-Laure | R01ES032470 | Int J Epidemiol (2021 Mar 03) |
33147614
|
2021 |
| Laboratory-wide association study of survival with prostate cancer. | Sohlberg, Ericka M; Thomas, I-Chun; Yang, Jaden; Kapphahn, Kristopher; Velaer, Kyla N; Goldstei ... | R01ES032470 | Cancer (2021 Apr 01) |
33237577
|
2021 |
| Leveraging vibration of effects analysis for robust discovery in observational biomedical data scien ... | Tierney, Braden T; Anderson, Elizabeth; Tan, Yingxuan; Claypool, Kajal; Tangirala, Sivateja; Ko ... | R01ES032470 | PLoS Biol (2021 09) |
34555021
|
2021 |
| Optimization of 1,4-bis(arylsulfonamido)naphthalene-N,N'-diacetic acids as inhibitors of Keap1-Nrf2 ... | Abed, Dhulfiqar Ali; Lee, Sumi; Wen, Xia; Ali, Ahmed R; Mangipudy, Vaibhav; Aleksunes, Lauren ... | P30ES005022, R01ES031080 | Bioorg Med Chem (2021 08 15) |
34252790
|
2021 |
| Predictive modeling of estrogen receptor agonism, antagonism, and binding activities using machine- ... | Ciallella, Heather L; Russo, Daniel P; Aleksunes, Lauren M; Grimm, Fabian A; Zhu, Hao | P30ES005022, R01ES031080 | Lab Invest (2021 Apr) |
32778734
|
2021 |
| Revealing Adverse Outcome Pathways from Public High-Throughput Screening Data to Evaluate New Toxica ... | Ciallella, Heather L; Russo, Daniel P; Aleksunes, Lauren M; Grimm, Fabian A; Zhu, Hao | P30ES005022, R01ES031080 | Environ Sci Technol (2021 08 03) |
34304572
|
2021 |
| Wearable sensors enable personalized predictions of clinical laboratory measurements. | Dunn, Jessilyn; Kidzinski, Lukasz; Runge, Ryan; Witt, Daniel; Hicks, Jennifer L; Schüssler-Fior ... | K08ES028825 | Nat Med (2021 06) |
34031607
|
2021 |
| Advancing computer-aided drug discovery (CADD) by big data and data-driven machine learning modeling ... | Zhao, Linlin; Ciallella, Heather L; Aleksunes, Lauren M; Zhu, Hao | P30ES005022, R01ES031080 | Drug Discov Today (2020 09) |
32663517
|
2020 |
| Construction of a web-based nanomaterial database by big data curation and modeling friendly nanostr ... | Yan, Xiliang; Sedykh, Alexander; Wang, Wenyi; Yan, Bing; Zhu, Hao | P30ES005022, R01ES031080 | Nat Commun (2020 05 20) |
32433469
|
2020 |
| Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California. | Sailani, M Reza; Metwally, Ahmed A; Zhou, Wenyu; Rose, Sophia Miryam Schüssler-Fiorenza; Ahadi, ... | K08ES028825 | Nat Commun (2020 10 01) |
33004787
|
2020 |
| Factors Associated with Supportive Care Service Use Among California Alzheimer's Disease Patients an ... | Newkirk, Lori A; Dao, Virginia L; Jordan, Joshua T; Alving, Loren I; Davies, Helen D; Hewett, ... | K08ES028825 | J Alzheimers Dis (2020) |
31743997
|
2020 |
| Geospatial Analysis of Individual and Community-Level Socioeconomic Factors Impacting SARS-CoV-2 Pre ... | Cromer, Sara J; Lakhani, Chirag M; Wexler, Deborah J; Burnett-Bowie, Sherri-Ann M; Udler, Miria ... | R01ES032470 | medRxiv (2020 Sep 30) |
33024982
|
2020 |
| Mechanism-Driven Read-Across of Chemical Hepatotoxicants Based on Chemical Structures and Biological ... | Zhao, Linlin; Russo, Daniel P; Wang, Wenyi; Aleksunes, Lauren M; Zhu, Hao | P30ES005022, R01ES031080 | Toxicol Sci (2020 04 01) |
32073637
|
2020 |
| Molecular Choreography of Acute Exercise. | Contrepois, Kévin; Wu, Si; Moneghetti, Kegan J; Hornburg, Daniel; Ahadi, Sara; Tsai, Ming-Shia ... | K08ES028825 | Cell (2020 05 28) |
32470399
|
2020 |
| Personal aging markers and ageotypes revealed by deep longitudinal profiling. | Ahadi, Sara; Zhou, Wenyu; Schüssler-Fiorenza Rose, Sophia Miryam; Sailani, M Reza; Contrepois, ... | K08ES028825 | Nat Med (2020 01) |
31932806
|
2020 |
| The 5-HTTLPR long allele predicts two-year longitudinal increases in cortisol and declines in verbal ... | Hirst, Rayna B; Jordan, Joshua T; Schüssler-Fiorenza Rose, Sophia Miryam; Schneider, Logan; Kawa ... | K08ES028825 | Int J Geriatr Psychiatry (2020 09) |
32400901
|
2020 |
| A longitudinal big data approach for precision health. | Schüssler-Fiorenza Rose, Sophia Miryam; Contrepois, Kévin; Moneghetti, Kegan J; Zhou, Wenyu; Mis ... | K08ES028825 | Nat Med (2019 05) |
31068711
|
2019 |
| Longitudinal multi-omics of host-microbe dynamics in prediabetes. | Zhou, Wenyu; Sailani, M Reza; Contrepois, Kévin; Zhou, Yanjiao; Ahadi, Sara; Leopold, Shana R; ... | K08ES028825 | Nature (2019 05) |
31142858
|
2019 |
| Carbon Nanotube and Nanofiber Exposure Assessments: An Analysis of 14 Site Visits. | Dahm, Matthew M; Schubauer-Berigan, Mary K; Evans, Douglas E; Birch, M Eileen; Fernback, Joseph ... | R44ES029001 | Ann Occup Hyg (2015 Jul) |
25851309
|
2015 |