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Viewing 121 publications
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| Publication Title | Authors | Grant Number(s) | Journal (Pub date) | PubMed Link | Pub Year |
|---|---|---|---|---|---|
| 13C-SpaceM: Spatial single-cell isotope tracing reveals heterogeneity of de novo fatty acid synthesi ... | Buglakova, Elena; Ekelöf, Måns; Schwaiger-Haber, Michaela; Schlicker, Lisa; Molenaar, Martijn R ... | R35ES028365 | bioRxiv (2024 Feb 28) |
38464218
|
2024 |
| Inducing vulnerability to InhA inhibition restores isoniazid susceptibility in drug-resistant Mycoba ... | Harrison, Gregory A; Wang, Erin R; Cho, Kevin; Mreyoud, Yassin; Sarkar, Souvik; Almqvist, Fred ... | R35ES028365 | mBio (2024 Mar 13) |
38294237
|
2024 |
| Application of Machine Learning to Metabolomic Profile Characterization in Glioblastoma Patients Und ... | Aboud, Orwa; Liu, Yin Allison; Fiehn, Oliver; Brydges, Christopher; Fragoso, Ruben; Lee, Han S ... | U2CES030158 | Metabolites (2023 Feb 17) |
36837918
|
2023 |
| Assessing the impact of boldine on the gastrocnemius using multiomics profiling at 7 and 28 days pos ... | Potter, Luke A; Toro, Carlos A; Harlow, Lauren; Lavin, Kaleen M; Cardozo, Christopher P; Wende, ... | U2CES030158 | Physiol Genomics (2023 Jul 01) |
37125768
|
2023 |
| Automatic Assignment of Molecular Ion Species to Elemental Formulas in Gas Chromatography/Methane Ch ... | Wang, Shunyang; Valdiviez, Luis; Ye, Honglian; Fiehn, Oliver | U2CES030158 | Metabolites (2023 Aug 19) |
37623905
|
2023 |
| Boldine Alters Serum Lipidomic Signatures after Acute Spinal Cord Transection in Male Mice. | Graham, Zachary A; Siedlik, Jacob A; Toro, Carlos A; Harlow, Lauren; Cardozo, Christopher P | U2CES030158 | Int J Environ Res Public Health (2023 Aug 17) |
37623175
|
2023 |
| Cellular transformation promotes the incorporation of docosahexaenoic acid into the endolysosome-spe ... | Berg, Anastasia L; Showalter, Megan R; Kosaisawe, Nont; Hu, Michelle; Stephens, Nathanial C; Sa ... | U2CES030158 | Cancer Lett (2023 Mar 31) |
36773796
|
2023 |
| Comparison of Plasma Metabolome Response to Diets Enriched in Soybean and Partially-Hydrogenated Soy ... | Huang, Neil K; Lichtenstein, Alice H; Matuszek, Gregory; Matthan, Nirupa R | U2CES030158 | Metabolites (2023 Mar 26) |
37110133
|
2023 |
| Cytosolic and mitochondrial NADPH fluxes are independently regulated. | Niu, Xiangfeng; Stancliffe, Ethan; Gelman, Susan J; Wang, Lingjue; Schwaiger-Haber, Michaela; R ... | R35ES028365 | Nat Chem Biol (2023 Jul) |
36973440
|
2023 |
| Denoising Autoencoder Normalization for Large-Scale Untargeted Metabolomics by Gas Chromatography-Ma ... | Zhang, Ying; Fan, Sili; Wohlgemuth, Gert; Fiehn, Oliver | U2CES030158 | Metabolites (2023 Aug 13) |
37623887
|
2023 |
| Differences in the Stool Metabolome between Vegans and Omnivores: Analyzing the NIST Stool Reference ... | Cumeras, Raquel; Shen, Tong; Valdiviez, Luis; Tippins, Zakery; Haffner, Bennett D; Fiehn, Oliv ... | U2CES030158 | Metabolites (2023 Aug 07) |
37623865
|
2023 |
| Effects of hepatic mitochondrial pyruvate carrier deficiency on de novo lipogenesis and gluconeogene ... | Yiew, Nicole K H; Deja, Stanislaw; Ferguson, Daniel; Cho, Kevin; Jarasvaraparn, Chaowapong; Jac ... | R35ES028365 | iScience (2023 Nov 17) |
37942005
|
2023 |
| Effects of hepatic mitochondrial pyruvate carrier deficiency on de novo lipogenesis and glycerol-med ... | Yiew, Nicole K H; Deja, Stanislaw; Ferguson, Daniel; Cho, Kevin; Jarasvaraparn, Chaowapong; Jac ... | R35ES028365 | bioRxiv (2023 Aug 24) |
36824879
|
2023 |
| Flash entropy search to query all mass spectral libraries in real time. | Li, Yuanyue; Fiehn, Oliver | U2CES030158 | Nat Methods (2023 Oct) |
37735567
|
2023 |
| Hyperammonaemia disrupts daily rhythms reversibly by elevating glutamate in the central circadian pa ... | Granados-Fuentes, Daniel; Cho, Kevin; Patti, Gary J; Costa, Rodolfo; Herzog, Erik D; Montagnese ... | R35ES028365 | Liver Int (2023 Mar) |
36367321
|
2023 |
| Inducing vulnerability to InhA inhibition restores isoniazid susceptibility in drug resistant Mycoba ... | Harrison, Gregory A; Cho, Kevin; Wang, Erin R; Sarkar, Souvik; Almqvist, Fredrik; Patti, Gary ... | R35ES028365 | bioRxiv (2023 Feb 07) |
36798348
|
2023 |
| Mitochondrial Pyruvate Carrier Inhibition Attenuates Hepatic Stellate Cell Activation and Liver Inju ... | Habibi, Mohammad; Ferguson, Daniel; Eichler, Sophie J; Chan, Mandy M; LaPoint, Andrew; Shew, T ... | R35ES028365 | bioRxiv (2023 Aug 25) |
36824926
|
2023 |
| MPI-VGAE: protein-metabolite enzymatic reaction link learning by variational graph autoencoders. | Wang, Cheng; Yuan, Chuang; Wang, Yahui; Chen, Ranran; Shi, Yuying; Zhang, Tao; Xue, Fuzhong; ... | R35ES028365 | Brief Bioinform (2023 Jul 20) |
37225420
|
2023 |
| Profile Characterization of Biogenic Amines in Glioblastoma Patients Undergoing Standard-of-Care Tre ... | Aboud, Orwa; Liu, Yin; Dahabiyeh, Lina; Abuaisheh, Ahmad; Li, Fangzhou; Aboubechara, John Paul ... | U2CES030158 | Biomedicines (2023 Aug 13) |
37626757
|
2023 |
| Sexual Dimorphism of the Mouse Plasma Metabolome Is Associated with Phenotypes of 30 Gene Knockout L ... | Zhang, Ying; Barupal, Dinesh K; Fan, Sili; Gao, Bei; Zhu, Chao; Flenniken, Ann M; McKerlie, C ... | U2CES030158 | Metabolites (2023 Aug 15) |
37623890
|
2023 |
| SMetaS: A Sample Metadata Standardizer for Metabolomics. | Bremer, Parker Ladd; Fiehn, Oliver | U2CES030158 | Metabolites (2023 Aug 12) |
37623884
|
2023 |
| Stromal DDR2 Promotes Ovarian Cancer Metastasis through Regulation of Metabolism and Secretion of Ex ... | Schab, Angela M; Greenwade, Molly M; Stock, Elizabeth; Lomonosova, Elena; Cho, Kevin; Grither, ... | R35ES028365 | Mol Cancer Res (2023 Nov 01) |
37527178
|
2023 |
| The BinDiscover database: a biology-focused meta-analysis tool for 156,000 GC-TOF MS metabolome samp ... | Bremer, Parker Ladd; Wohlgemuth, Gert; Fiehn, Oliver | U2CES030158 | J Cheminform (2023 Jul 20) |
37475020
|
2023 |
| The Warburg effect: a signature of mitochondrial overload. | Wang, Yahui; Patti, Gary J | R35ES028365 | Trends Cell Biol (2023 Dec) |
37117116
|
2023 |
| A multidimensional metabolomics workflow to image biodistribution and evaluate pharmacodynamics in a ... | Jackstadt, Madelyn M; Chamberlain, Casey A; Doonan, Steven R; Shriver, Leah P; Patti, Gary J | R35ES028365 | Dis Model Mech (2022 Aug 01) |
35972155
|
2022 |
| Acyl-CoA Identification in Mouse Liver Samples Using the In Silico CoA-Blast Tandem Mass Spectral Li ... | Keshet, Uri; Kind, Tobias; Lu, Xinchen; Devi, Sarita; Fiehn, Oliver | U2CES030158 | Anal Chem (2022 Feb 15) |
35119811
|
2022 |
| An Untargeted Metabolomics Workflow that Scales to Thousands of Samples for Population-Based Studies ... | Stancliffe, Ethan; Schwaiger-Haber, Michaela; Sindelar, Miriam; Murphy, Matthew J; Soerensen, M ... | R35ES028365 | Anal Chem (2022 Dec 20) |
36475608
|
2022 |
| Beyond the Ground State: Predicting Electron Ionization Mass Spectra Using Excited-State Molecular D ... | Wang, Shunyang; Kind, Tobias; Bremer, Parker Ladd; Tantillo, Dean J; Fiehn, Oliver | U2CES030158 | J Chem Inf Model (2022 Sep 26) |
36107950
|
2022 |
| Combining Isotopologue Workflows and Simultaneous Multidimensional Separations to Detect, Identify, ... | Dodds, James N; Wang, Lingjue; Patti, Gary J; Baker, Erin S | P30ES025128, P42ES027704, P42ES027704, P42ES031009, P42ES031009, R35ES028365 | Anal Chem (2022 Feb 08) |
35089687
|
2022 |
| Effects of Lean Pork on Microbiota and Microbial-Metabolite Trimethylamine-N-Oxide: A Randomized Con ... | Dhakal, Samitinjaya; Moazzami, Zahra; Perry, Cydne; Dey, Moul | U2CES030158 | Mol Nutr Food Res (2022 May) |
35182101
|
2022 |
| Evaluating the Accuracy of the QCEIMS Approach for Computational Prediction of Electron Ionization M ... | Lee, Jesi; Kind, Tobias; Tantillo, Dean Joseph; Wang, Lee-Ping; Fiehn, Oliver | U2CES030158 | Metabolites (2022 Jan 12) |
35050190
|
2022 |
| GAS6-AXL Inhibition by AVB-500 Overcomes Resistance to Paclitaxel in Endometrial Cancer by Decreasin ... | Bruce, Shaina F; Cho, Kevin; Noia, Hollie; Lomonosova, Elena; Stock, Elizabeth C; Oplt, Alyssa ... | R35ES028365 | Mol Cancer Ther (2022 Aug 02) |
35588308
|
2022 |
| Glutathione deficiency decreases lipid droplet stores and increases reactive oxygen species in mouse ... | Malott, Kelli F; Reshel, Samantha; Ortiz, Laura; Luderer, Ulrike | R01ES020454, R01ES020454, U2CES030158 | Biol Reprod (2022 Jun 13) |
35238901
|
2022 |
| How Well Can We Predict Mass Spectra from Structures? Benchmarking Competitive Fragmentation Modelin ... | Bremer, Parker Ladd; Vaniya, Arpana; Kind, Tobias; Wang, Shunyang; Fiehn, Oliver | U2CES030158 | J Chem Inf Model (2022 Sep 12) |
36043939
|
2022 |
| Lipidomics of cyclophosphamide 4-hydroxylation in patients receiving post-transplant cyclophosphamid ... | Navarro, Sandi L; Zheng, Zihan; Randolph, Timothy W; Nakamura, Ryotaro; Sandmaier, Brenda M; Ho ... | U2CES030158 | Clin Transl Sci (2022 Nov) |
36088654
|
2022 |
| Methods to capture proteomic and metabolomic signatures from cerebrospinal fluid and serum of health ... | Lilley, Laura M; Sanche, Steven; Moore, Shepard C; Salemi, Michelle R; Vu, Dung; Iyer, Sriniva ... | U2CES030158 | Sci Rep (2022 Aug 03) |
35922450
|
2022 |
| Mitochondrial pyruvate carrier inhibitors improve metabolic parameters in diet-induced obese mice. | Hodges, Wesley T; Jarasvaraparn, Chaowapong; Ferguson, Daniel; Griffett, Kristine; Gill, Lauren ... | R35ES028365 | J Biol Chem (2022 Feb) |
34973337
|
2022 |
| Monounsaturated and Diunsaturated Fatty Acids Sensitize Cervical Cancer to Radiation Therapy. | Muhammad, Naoshad; Ruiz, Fiona; Stanley, Jennifer; Rashmi, Ramachandran; Cho, Kevin; Jayachandr ... | R35ES028365 | Cancer Res (2022 Dec 16) |
36214635
|
2022 |
| Mouse models of NADK2 deficiency analyzed for metabolic and gene expression changes to elucidate pat ... | Murray, G C; Bais, P; Hatton, C L; Tadenev, A L D; Hoffmann, B R; Stodola, T J; Morelli, K H; ... | U2CES030158 | Hum Mol Genet (2022 Nov 28) |
35796562
|
2022 |
| Pharmacometabonomic association of cyclophosphamide 4-hydroxylation in hematopoietic cell transplant ... | McCune, Jeannine S; Nakamura, Ryotaro; O'Meally, Denis; Randolph, Timothy W; Sandmaier, Brenda ... | U2CES030158 | Clin Transl Sci (2022 May) |
35106927
|
2022 |
| Plasma Metabolite Profiles Following Consumption of Animal Protein and Soybean-Based Diet in Hyperch ... | Huang, Neil K; Matthan, Nirupa R; Matuszek, Gregory; Lichtenstein, Alice H | U2CES030158 | Metabolites (2022 Feb 25) |
35323651
|
2022 |
| Plasma Metabolite Response to Simple, Refined and Unrefined Carbohydrate-Enriched Diets in Older Adu ... | Huang, Neil K; Matthan, Nirupa R; Matuszek, Gregory; Lichtenstein, Alice H | U2CES030158 | Metabolites (2022 Jun 15) |
35736480
|
2022 |
| Quantum Chemical Prediction of Electron Ionization Mass Spectra of Trimethylsilylated Metabolites. | Wang, Shunyang; Kind, Tobias; Bremer, Parker Ladd; Tantillo, Dean J; Fiehn, Oliver | U2CES030158 | Anal Chem (2022 Jan 25) |
35006668
|
2022 |
| Quick tips for re-using metabolomics data. | Stancliffe, Ethan; Patti, Gary J | R35ES028365 | Nat Cell Biol (2022 Nov) |
36280705
|
2022 |
| Saturation of the mitochondrial NADH shuttles drives aerobic glycolysis in proliferating cells. | Wang, Yahui; Stancliffe, Ethan; Fowle-Grider, Ronald; Wang, Rencheng; Wang, Cheng; Schwaiger-Ha ... | R35ES028365 | Mol Cell (2022 Sep 01) |
35973426
|
2022 |
| Sex differences in brain tumor glutamine metabolism reveal sex-specific vulnerabilities to treatment ... | Sponagel, Jasmin; Jones, Jill K; Frankfater, Cheryl; Zhang, Shanshan; Tung, Olivia; Cho, Kevin ... | R35ES028365 | Med (2022 Nov 11) |
36108629
|
2022 |
| Silencing alanine transaminase 2 in diabetic liver attenuates hyperglycemia by reducing gluconeogene ... | Martino, Michael R; Gutiérrez-Aguilar, Manuel; Yiew, Nicole K H; Lutkewitte, Andrew J; Singer, ... | R35ES028365 | Cell Rep (2022 Apr 26) |
35476997
|
2022 |
| SS-31 does not prevent or reduce muscle atrophy 7 days after a 65 kdyne contusion spinal cord injury ... | Graham, Zachary A; DeBerry, Jennifer J; Cardozo, Christopher P; Bamman, Marcas M | U2CES030158 | Physiol Rep (2022 May) |
35611788
|
2022 |
| Targeting fatty acid β-oxidation impairs monocyte differentiation and prolongs heart allograft survi ... | Zhu, Yuehui; Dun, Hao; Ye, Li; Terada, Yuriko; Shriver, Leah P; Patti, Gary J; Kreisel, Danie ... | R35ES028365 | JCI Insight (2022 Apr 08) |
35239515
|
2022 |
| A metabolome atlas of the aging mouse brain. | Ding, Jun; Ji, Jian; Rabow, Zachary; Shen, Tong; Folz, Jacob; Brydges, Christopher R; Fan, Si ... | U2CES030158 | Nat Commun (2021 Oct 15) |
34654818
|
2021 |
| A Protocol for Untargeted Metabolomic Analysis: From Sample Preparation to Data Processing. | Souza, Amanda L; Patti, Gary J | R35ES028365 | Methods Mol Biol (2021) |
34060055
|
2021 |
| Comparing Stable Isotope Enrichment by Gas Chromatography with Time-of-Flight, Quadrupole Time-of-Fl ... | Zhang, Ying; Gao, Bei; Valdiviez, Luis; Zhu, Chao; Gallagher, Tara; Whiteson, Katrine; Fiehn, ... | U2CES030158 | Anal Chem (2021 Feb 02) |
33434014
|
2021 |
| Comprehensive metabolomic study of the response of HK-2 cells to hyperglycemic hypoxic diabetic-like ... | Valdés, Alberto; Lucio-Cazaña, Francisco J; Castro-Puyana, María; García-Pastor, Coral; Fiehn, ... | U2CES030158 | Sci Rep (2021 Mar 03) |
33658594
|
2021 |
| DecoID improves identification rates in metabolomics through database-assisted MS/MS deconvolution. | Stancliffe, Ethan; Schwaiger-Haber, Michaela; Sindelar, Miriam; Patti, Gary J | R35ES028365 | Nat Methods (2021 Jul) |
34239103
|
2021 |
| Deletion of Glut1 in early postnatal cartilage reprograms chondrocytes toward enhanced glutamine oxi ... | Wang, Cuicui; Ying, Jun; Niu, Xiangfeng; Li, Xiaofei; Patti, Gary J; Shen, Jie; O'Keefe, Regi ... | R35ES028365 | Bone Res (2021 Aug 23) |
34426569
|
2021 |
| HERMES: a molecular-formula-oriented method to target the metabolome. | Giné, Roger; Capellades, Jordi; Badia, Josep M; Vughs, Dennis; Schwaiger-Haber, Michaela; Alexa ... | R35ES028365 | Nat Methods (2021 Nov) |
34725482
|
2021 |
| HIF1α is required for NK cell metabolic adaptation during virus infection. | Victorino, Francisco; Bigley, Tarin M; Park, Eugene; Yao, Cong-Hui; Benoit, Jeanne; Yang, Li-P ... | R35ES028365 | Elife (2021 Aug 16) |
34396954
|
2021 |
| Isotope tracing in adult zebrafish reveals alanine cycling between melanoma and liver. | Naser, Fuad J; Jackstadt, Madelyn M; Fowle-Grider, Ronald; Spalding, Jonathan L; Cho, Kevin; St ... | R35ES028365 | Cell Metab (2021 07 06) |
33989520
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2021 |
| Leucoselect Phytosome Modulates Serum Eicosapentaenoic Acid, Docosahexaenoic Acid, and Prostaglandin ... | Mao, Jenny T; Xue, Bingye; Fan, Sili; Neis, Patricia; Qualls, Clifford; Massie, Larry; Fiehn, ... | U2CES030158 | Cancer Prev Res (Phila) (2021 06) |
33707173
|
2021 |
| Longitudinal Metabolomics of Human Plasma Reveals Robust Prognostic Markers of COVID-19 Disease Seve ... | Sindelar, Miriam; Stancliffe, Ethan; Schwaiger-Haber, Michaela; Anbukumar, Dhanalakshmi S; Albre ... | R35ES028365 | medRxiv (2021 Feb 08) |
33564793
|
2021 |
| Loss of SNORA73 reprograms cellular metabolism and protects against steatohepatitis. | Sletten, Arthur C; Davidson, Jessica W; Yagabasan, Busra; Moores, Samantha; Schwaiger-Haber, Mi ... | R35ES028365 | Nat Commun (2021 Sep 01) |
34471131
|
2021 |
| Metabolomics of Lung Microdissections Reveals Region- and Sex-Specific Metabolic Effects of Acute Na ... | Stevens, Nathanial C; Edwards, Patricia C; Tran, Lisa M; Ding, Xinxin; Van Winkle, Laura S; Fie ... | P30ES023513, R01ES020867, T32ES007059, T32ES007091, U2CES030158 | Toxicol Sci (2021 Nov 24) |
34498071
|
2021 |
| Plasma lipidomics profile in pregnancy and gestational diabetes risk: a prospective study in a multi ... | Rahman, Mohammad L; Feng, Yen-Chen A; Fiehn, Oliver; Albert, Paul S; Tsai, Michael Y; Zhu, Yey ... | U2CES030158 | BMJ Open Diabetes Res Care (2021 03) |
33674279
|
2021 |
| Quantitative rotational-echo double resonance for Carbon-13 spin clusters. | Matsuoka, Shigeru; Sindelar, Miriam; Bansal, Sonal; Patti, Gary J; Schaefer, Jacob | R35ES028365 | J Magn Reson (2021 09) |
34364107
|
2021 |
| Quantum Chemistry Calculations for Metabolomics. | Borges, Ricardo M; Colby, Sean M; Das, Susanta; Edison, Arthur S; Fiehn, Oliver; Kind, Tobias; ... | U2CES030158 | Chem Rev (2021 May 26) |
33979149
|
2021 |
| Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification ... | Li, Yuanyue; Kind, Tobias; Folz, Jacob; Vaniya, Arpana; Mehta, Sajjan Singh; Fiehn, Oliver | U2CES030158 | Nat Methods (2021 Dec) |
34857935
|
2021 |
| Targeting unique biological signals on the fly to improve MS/MS coverage and identification efficien ... | Cho, Kevin; Schwaiger-Haber, Michaela; Naser, Fuad J; Stancliffe, Ethan; Sindelar, Miriam; Patt ... | R35ES028365 | Anal Chim Acta (2021 Mar 08) |
33551064
|
2021 |
| Alteration of Cellular Reduction Potential Will Change 64Cu-ATSM Signal With or Without Hypoxia. | Floberg, John M; Wang, Lingjue; Bandara, Nilantha; Rashmi, Ramachandran; Mpoy, Cedric; Garbow, ... | R35ES028365 | J Nucl Med (2020 03) |
31586008
|
2020 |
| Author Correction: Structure of human GABAB receptor in an inactive state. | Park, Jinseo; Fu, Ziao; Frangaj, Aurel; Liu, Jonathan; Mosyak, Lidia; Shen, Tong; Slavkovich, ... | U2CES030158 | Nature (2020 Jul) |
32665714
|
2020 |
| Chemical Discovery in the Era of Metabolomics. | Sindelar, Miriam; Patti, Gary J | R35ES028365 | J Am Chem Soc (2020 05 20) |
32275430
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2020 |
| Dietary serine-microbiota interaction enhances chemotherapeutic toxicity without altering drug conve ... | Ke, Wenfan; Saba, James A; Yao, Cong-Hui; Hilzendeger, Michael A; Drangowska-Way, Anna; Joshi, ... | R35ES028365 | Nat Commun (2020 May 22) |
32444616
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2020 |
| Dose-Response Metabolomics To Understand Biochemical Mechanisms and Off-Target Drug Effects with the ... | Yao, Cong-Hui; Wang, Lingjue; Stancliffe, Ethan; Sindelar, Miriam; Cho, Kevin; Yin, Weitong; W ... | R35ES028365 | Anal Chem (2020 01 21) |
31804057
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2020 |
| Exosomes in disease and regeneration: biological functions, diagnostics, and beneficial effects. | Lin, Yun; Anderson, Johnathon D; Rahnama, Lily M A; Gu, Shenwen V; Knowlton, Anne A | U2CES030158 | Am J Physiol Heart Circ Physiol (2020 Dec 01) |
32986962
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2020 |
| Glutaminase Inhibitors Induce Thiol-Mediated Oxidative Stress and Radiosensitization in Treatment-Re ... | Rashmi, Ramachandran; Jayachandran, Kay; Zhang, Jin; Menon, Vishnu; Muhammad, Naoshad; Zahner, ... | P30ES005605, R35ES028365 | Mol Cancer Ther (2020 12) |
33087507
|
2020 |
| In-Silico-Generated Library for Sensitive Detection of 2-Dimethylaminoethylamine Derivatized FAHFA L ... | Ding, Jun; Kind, Tobias; Zhu, Quan-Fei; Wang, Yu; Yan, Jing-Wen; Fiehn, Oliver; Feng, Yu-Qi | U2CES030158 | Anal Chem (2020 04 21) |
32202765
|
2020 |
| JARID1a Ablation in the Liver Alters Systemic Metabolism and Adaptation to Feeding. | DiTacchio, Kacee Ann; Kalinowska, Diana; Saran, Anand Rajamani; Byrne, Ashley; Vollmers, Christ ... | U2CES030158 | Cell Rep (2020 05 26) |
32460011
|
2020 |
| Leveraging insights into cancer metabolism-a symposium report. | Cable, Jennifer; Finley, Lydia; Tu, Benjamin P; Patti, Gary J; Oliver, Trudy G; Vardhana, Sant ... | R35ES028365 | Ann N Y Acad Sci (2020 02) |
31792987
|
2020 |
| Preclinical translation of exosomes derived from mesenchymal stem/stromal cells. | Elahi, Fanny M; Farwell, D Gregory; Nolta, Jan A; Anderson, Johnathon D | U2CES030158 | Stem Cells (2020 01) |
31381842
|
2020 |
| Predicting in silico electron ionization mass spectra using quantum chemistry. | Wang, Shunyang; Kind, Tobias; Tantillo, Dean J; Fiehn, Oliver | U2CES030158 | J Cheminform (2020 Oct 20) |
33372633
|
2020 |
| Remodeling Lipids in the Transition from Chronic Liver Disease to Hepatocellular Carcinoma. | Ismail, Israa T; Elfert, Ashraf; Helal, Marwa; Salama, Ibrahim; El-Said, Hala; Fiehn, Oliver | U2CES030158 | Cancers (Basel) (2020 Dec 30) |
33396945
|
2020 |
| Retip: Retention Time Prediction for Compound Annotation in Untargeted Metabolomics. | Bonini, Paolo; Kind, Tobias; Tsugawa, Hiroshi; Barupal, Dinesh Kumar; Fiehn, Oliver | U2CES030158 | Anal Chem (2020 Jun 02) |
32390414
|
2020 |
| Structure of human GABAB receptor in an inactive state. | Park, Jinseo; Fu, Ziao; Frangaj, Aurel; Liu, Jonathan; Mosyak, Lidia; Shen, Tong; Slavkovich, ... | P30ES009089, U2CES030158 | Nature (2020 Aug) |
32581365
|
2020 |
| Sugar Alcohols Have a Key Role in Pathogenesis of Chronic Liver Disease and Hepatocellular Carcinoma ... | Ismail, Israa T; Fiehn, Oliver; Elfert, Ashraf; Helal, Marwa; Salama, Ibrahim; El-Said, Hala | U2CES030158 | Cancers (Basel) (2020 Feb 19) |
32092943
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2020 |
| The Emerging and Diverse Roles of Bis(monoacylglycero) Phosphate Lipids in Cellular Physiology and D ... | Showalter, Megan R; Berg, Anastasia L; Nagourney, Alexander; Heil, Hailey; Carraway 3rd, Kermit ... | U2CES030158 | Int J Mol Sci (2020 Oct 29) |
33137979
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2020 |
| Utilizing cooled liquid chromatography and chemical derivatization to separate and quantify C3-epime ... | DeFelice, Brian C; Pedersen, Theresa L; Shorrosh, Hanan; Johnson, Randi K; Seifert, Jennifer A; ... | U2CES030158 | J Steroid Biochem Mol Biol (2020 03) |
31715316
|
2020 |
| Zika Virus Infection Results in Biochemical Changes Associated With RNA Editing, Inflammatory and An ... | Onyango, Maria G; Attardo, Geoffrey M; Kelly, Erin Taylor; Bialosuknia, Sean M; Stout, Jessica; ... | U2CES030158 | Front Microbiol (2020) |
33133033
|
2020 |
| 17-α estradiol ameliorates age-associated sarcopenia and improves late-life physical function in mal ... | Garratt, Michael; Leander, Danielle; Pifer, Kaitlyn; Bower, Brian; Herrera, Jonathan J; Day, S ... | U2CES030158 | Aging Cell (2019 04) |
30740872
|
2019 |
| A Comprehensive Plasma Metabolomics Dataset for a Cohort of Mouse Knockouts within the International ... | Barupal, Dinesh K; Zhang, Ying; Shen, Tong; Fan, Sili; Roberts, Bryan S; Fitzgerald, Patrick; ... | U2CES030158 | Metabolites (2019 May 22) |
31121816
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2019 |
| A Protocol to Compare Methods for Untargeted Metabolomics. | Wang, Lingjue; Naser, Fuad J; Spalding, Jonathan L; Patti, Gary J | R35ES028365 | Methods Mol Biol (2019) |
30315456
|
2019 |
| Exogenous Monounsaturated Fatty Acids Promote a Ferroptosis-Resistant Cell State. | Magtanong, Leslie; Ko, Pin-Joe; To, Milton; Cao, Jennifer Yinuo; Forcina, Giovanni C; Tarangelo ... | R35ES028365 | Cell Chem Biol (2019 Mar 21) |
30686757
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2019 |
| Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approac ... | Barupal, Dinesh Kumar; Fiehn, Oliver | U2CES030158 | Environ Health Perspect (2019 09) |
31557052
|
2019 |
| Hepatic monoacylglycerol acyltransferase 1 is induced by prolonged food deprivation to modulate the ... | Lutkewitte, Andrew J; McCommis, Kyle S; Schweitzer, George G; Chambers, Kari T; Graham, Mark J; ... | R35ES028365 | J Lipid Res (2019 03) |
30610082
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2019 |
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30449686
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2019 |
| Impaired skeletal muscle mitochondrial pyruvate uptake rewires glucose metabolism to drive whole-bod ... | Sharma, Arpit; Oonthonpan, Lalita; Sheldon, Ryan D; Rauckhorst, Adam J; Zhu, Zhiyong; Tompkins, ... | R35ES028365 | Elife (2019 Jul 18) |
31305240
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2019 |
| Inborn Errors of Metabolism in the Era of Untargeted Metabolomics and Lipidomics. | Ismail, Israa T; Showalter, Megan R; Fiehn, Oliver | U2CES030158 | Metabolites (2019 Oct 21) |
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2019 |
| International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Seru ... | Thompson, J Will; Adams, Kendra J; Adamski, Jerzy; Asad, Yasmin; Borts, David; Bowden, John A; ... | R35ES028365 | Anal Chem (2019 11 19) |
31638379
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2019 |
| Metabolomics Analyses of 14 Classical Neurotransmitters by GC-TOF with LC-MS Illustrates Secretion o ... | Hook, Vivian; Kind, Tobias; Podvin, Sonia; Palazoglu, Mine; Tran, Carol; Toneff, Thomas; Samra ... | U2CES030158 | ACS Chem Neurosci (2019 03 20) |
30698015
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2019 |
| Mitochondrial fusion supports increased oxidative phosphorylation during cell proliferation. | Yao, Cong-Hui; Wang, Rencheng; Wang, Yahui; Kung, Che-Pei; Weber, Jason D; Patti, Gary J | R35ES028365 | Elife (2019 01 29) |
30694178
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2019 |
| Ontology-based metabolomics data integration with quality control. | Buendia, Patricia; Bradley, Ray M; Taylor, Thomas J; Schymanski, Emma L; Patti, Gary J; Kabuka, ... | R35ES028365 | Bioanalysis (2019 Jun) |
31179719
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2019 |
| Perspectives on Data Analysis in Metabolomics: Points of Agreement and Disagreement from the 2018 AS ... | Baker, Erin S; Patti, Gary J | R35ES028365 | J Am Soc Mass Spectrom (2019 Oct) |
31440979
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2019 |
| Primed mesenchymal stem cells package exosomes with metabolites associated with immunomodulation. | Showalter, Megan R; Wancewicz, Benjamin; Fiehn, Oliver; Archard, Joehleen A; Clayton, Shannon; ... | U2CES030158 | Biochem Biophys Res Commun (2019 05 14) |
30926165
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2019 |
| Rapid LC-MS/MS quantification of cancer related acetylated polyamines in human biofluids. | DeFelice, Brian C; Fiehn, Oliver | U2CES030158 | Talanta (2019 May 01) |
30683386
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2019 |
| Serum and urinary metabolomics and outcomes in cirrhosis. | Bajaj, Jasmohan S; Fan, Sili; Thacker, Leroy R; Fagan, Andrew; Gavis, Edith; White, Melanie B; ... | U2CES030158 | PLoS One (2019) |
31560724
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2019 |
| Sets of coregulated serum lipids are associated with Alzheimer's disease pathophysiology. | Barupal, Dinesh Kumar; Baillie, Rebecca; Fan, Sili; Saykin, Andrew J; Meikle, Peter J; Arnold, ... | U2CES030158 | Alzheimers Dement (Amst) (2019 Dec) |
31517024
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2019 |
| Structure Annotation of All Mass Spectra in Untargeted Metabolomics. | Blaženović, Ivana; Kind, Tobias; Sa, Michael R; Ji, Jian; Vaniya, Arpana; Wancewicz, Benjamin; ... | U2CES030158 | Anal Chem (2019 02 05) |
30608141
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2019 |
| Systematic Error Removal Using Random Forest for Normalizing Large-Scale Untargeted Lipidomics Data. | Fan, Sili; Kind, Tobias; Cajka, Tomas; Hazen, Stanley L; Tang, W H Wilson; Kaddurah-Daouk, Rim ... | U2CES030158 | Anal Chem (2019 03 05) |
30758187
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2019 |
| Systems-level analysis of isotopic labeling in untargeted metabolomic data by X13CMS. | Llufrio, Elizabeth M; Cho, Kevin; Patti, Gary J | R35ES028365 | Nat Protoc (2019 07) |
31168088
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2019 |
| Consumption of NADPH for 2-HG Synthesis Increases Pentose Phosphate Pathway Flux and Sensitizes Cell ... | Gelman, Susan J; Naser, Fuad; Mahieu, Nathaniel G; McKenzie, Lisa D; Dunn, Gavin P; Chheda, Mi ... | R35ES028365 | Cell Rep (2018 01 09) |
29320744
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2018 |
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30364174
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2018 |
| Diversity of Neuropeptide Cell-Cell Signaling Molecules Generated by Proteolytic Processing Revealed ... | Hook, Vivian; Lietz, Christopher B; Podvin, Sonia; Cajka, Tomas; Fiehn, Oliver | U2CES030158 | J Am Soc Mass Spectrom (2018 May) |
29667161
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2018 |
| Identifying off-target effects of etomoxir reveals that carnitine palmitoyltransferase I is essentia ... | Yao, Cong-Hui; Liu, Gao-Yuan; Wang, Rencheng; Moon, Sung Ho; Gross, Richard W; Patti, Gary J | R35ES028365 | PLoS Biol (2018 Mar) |
29596410
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2018 |
| Integrating bioinformatics approaches for a comprehensive interpretation of metabolomics datasets. | Barupal, Dinesh Kumar; Fan, Sili; Fiehn, Oliver | U2CES030158 | Curr Opin Biotechnol (2018 12) |
29413745
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2018 |
| Isotope Tracing Untargeted Metabolomics Reveals Macrophage Polarization-State-Specific Metabolic Coo ... | Puchalska, Patrycja; Huang, Xiaojing; Martin, Shannon E; Han, Xianlin; Patti, Gary J; Crawford, ... | R35ES028365 | iScience (2018 Nov 30) |
30448730
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2018 |
| Mechanism of High-Level Daptomycin Resistance in Corynebacterium striatum. | Goldner, Nicholas K; Bulow, Christopher; Cho, Kevin; Wallace, Meghan; Hsu, Fong-Fu; Patti, Gar ... | R35ES028365 | mSphere (2018 08 08) |
30089649
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2018 |
| Metabolic and Transcriptional Modules Independently Diversify Plasma Cell Lifespan and Function. | Lam, Wing Y; Jash, Arijita; Yao, Cong-Hui; D'Souza, Lucas; Wong, Rachel; Nunley, Ryan M; Meare ... | R35ES028365 | Cell Rep (2018 08 28) |
30157439
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2018 |
| Sorting cells alters their redox state and cellular metabolome. | Llufrio, Elizabeth M; Wang, Lingjue; Naser, Fuad J; Patti, Gary J | R35ES028365 | Redox Biol (2018 Jun) |
29627745
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2018 |
| Trace Phosphate Improves ZIC-pHILIC Peak Shape, Sensitivity, and Coverage for Untargeted Metabolomic ... | Spalding, Jonathan L; Naser, Fuad J; Mahieu, Nathaniel G; Johnson, Stephen L; Patti, Gary J | R35ES028365 | J Proteome Res (2018 10 05) |
30160483
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2018 |
| Transport-exclusion pharmacology to localize lactate dehydrogenase activity within cells. | Niu, Xiangfeng; Chen, Ying-Jr; Crawford, Peter A; Patti, Gary J | R35ES028365 | Cancer Metab (2018) |
30559963
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2018 |
| Two complementary reversed-phase separations for comprehensive coverage of the semipolar and nonpola ... | Naser, Fuad J; Mahieu, Nathaniel G; Wang, Lingjue; Spalding, Jonathan L; Johnson, Stephen L; Pa ... | R35ES028365 | Anal Bioanal Chem (2018 Feb) |
29256075
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2018 |
| Environmental Tobacco Smoke Alters Metabolic Systems in Adult Rats. | Barupal, Dinesh K; Pinkerton, Kent E; Hood, Carol; Kind, Tobias; Fiehn, Oliver | P30ES023513, U2CES030158 | Chem Res Toxicol (2016 11 21) |
27788581
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2016 |
| Maximizing the value of metabolomic data. | Goeddel, L C; Patti, G J | R35ES028365 | Bioanalysis (2012 Sep) |
23046261
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2012 |