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Who We Fund: Publications associated with Application Of Technology To Disease - Bioinformatics / BISTI Related

These search results have not been confirmed by NIEHS and are therefore, not official. They are to be used only for general information and to inform the public and grantees on the breadth of research funded by NIEHS.

Viewing 32 publications
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Publication Title Authors Grant Number(s) Journal (Pub date) PubMed Link Pub Year
Classifying Depression Severity in Recovery From Major Depressive Disorder via Dynamic Facial Featur ...   Harati, Sahar; Crowell, Andrea; Huang, Yijian; Mayberg, Helen; Nemati, Shamim K01ES025445 IEEE J Biomed Health Inform (2020 03) 31352356 Exiting the NIEHS site 2020 
Detecting heart failure using wearables: a pilot study.   Shah, Amit J; Isakadze, Nino; Levantsevych, Oleksiy; Vest, Adriana; Clifford, Gari; Nemati, Sh ... K01ES025445 Physiol Meas (2020 05 04) 32163936 Exiting the NIEHS site 2020 
Early Prediction of Sepsis From Clinical Data: The PhysioNet/Computing in Cardiology Challenge 2019.   Reyna, Matthew A; Josef, Christopher S; Jeter, Russell; Shashikumar, Supreeth P; Westover, M Br ... K01ES025445 Crit Care Med (2020 Feb) 31939789 Exiting the NIEHS site 2020 
An Assessment of Environmental Health Measures in the Deepwater Horizon Research Consortia.   Pan, Huaqin; Edwards, Stephen W; Ives, Cataia; Covert, Hannah; Harville, Emily W; Lichtveld, M ... R24ES028479 Curr Opin Toxicol (2019 Aug) 32457927 Exiting the NIEHS site 2019 
Ventricular ectopic beat detection using a wavelet transform and a convolutional neural network.   Li, Qichen; Liu, Chengyu; Li, Qiao; Shashikumar, Supreeth P; Nemati, Shamim; Shen, Zichao; Cli ... K01ES025445 Physiol Meas (2019 06 04) 30970338 Exiting the NIEHS site 2019 
A comparison of entropy approaches for AF discrimination.   Liu, Chengyu; Oster, Julien; Reinertsen, Erik; Li, Qiao; Zhao, Lina; Nemati, Shamim; Clifford, ... K01ES025445 Physiol Meas (2018 07 06) 29897343 Exiting the NIEHS site 2018 
A Deep Deterministic Policy Gradient Approach to Medication Dosing and Surveillance in the ICU.   Lin, Rongmei; Stanley, Matthew D; Ghassemi, Mohammad M; Nemati, Shamim K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2018 07) 30441448 Exiting the NIEHS site 2018 
A FHIR-Enabled Streaming Sepsis Prediction System for ICUs.   Henry, Joel R; Lynch, Dennis; Mals, Jeff; Shashikumar, Supreeth P; Holder, Andre; Sharma, Ashi ... K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2018 07) 30441256 Exiting the NIEHS site 2018 
A Model-Based Machine Learning Approach to Probing Autonomic Regulation From Nonstationary Vital-Sig ...   Lehman, Li-Wei H; Mark, Roger G; Nemati, Shamim K01ES025445 IEEE J Biomed Health Inform (2018 01) 27959829 Exiting the NIEHS site 2018 
A review of physiological and behavioral monitoring with digital sensors for neuropsychiatric illnes ...   Reinertsen, Erik; Clifford, Gari D K01ES025445 Physiol Meas (2018 05 15) 29671754 Exiting the NIEHS site 2018 
An Interpretable Machine Learning Model for Accurate Prediction of Sepsis in the ICU.   Nemati, Shamim; Holder, Andre; Razmi, Fereshteh; Stanley, Matthew D; Clifford, Gari D; Buchman, ... K01ES025445 Crit Care Med (2018 04) 29286945 Exiting the NIEHS site 2018 
An open source benchmarked toolbox for cardiovascular waveform and interval analysis.   Vest, Adriana N; Da Poian, Giulia; Li, Qiao; Liu, Chengyu; Nemati, Shamim; Shah, Amit J; Cliff ... K01ES025445 Physiol Meas (2018 10 11) 30199376 Exiting the NIEHS site 2018 
Deep learning in the cross-time frequency domain for sleep staging from a single-lead electrocardiog ...   Li, Qiao; Li, Qichen; Liu, Chengyu; Shashikumar, Supreeth P; Nemati, Shamim; Clifford, Gari D K01ES025445 Physiol Meas (2018 12 21) 30524025 Exiting the NIEHS site 2018 
Depression Severity Classification from Speech Emotion.   Harati, Sahar; Crowell, Andrea; Mayberg, Helen; Nemati, Shamim K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2018 07) 30441645 Exiting the NIEHS site 2018 
Doubly-Robust Estimation of Effect of Imaging Resource Utilization on Discharge Decisions in Emergen ...   Tabaie, Azade; Chokshi, Falgun H; Holder, Andre L; Nemati, Shamim Nemati K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2018 07) 30441086 Exiting the NIEHS site 2018 
How is the Doctor Feeling? ICU Provider Sentiment is Associated with Diagnostic Imaging Utilization.   Ghassemi, Mohammad M; Al-Hanai, Tuka; Raffa, Jesse D; Mark, Roger G; Nemati, Shamim; Chokshi, ... K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2018 07) 30441248 Exiting the NIEHS site 2018 
It Is About Time: Extinguishing the Fire of Acute Kidney Injury.   Josef, Christopher S; Nemati, Shamim K01ES025445 Crit Care Med (2018 07) 29912099 Exiting the NIEHS site 2018 
Looking Into the Seeds of Time to Say Which Fevers Will Grow and Which Will Not.   Nemati, Shamim K01ES025445 Crit Care Med (2018 04) 29538119 Exiting the NIEHS site 2018 
Multiscale network dynamics between heart rate and locomotor activity are altered in schizophrenia.   Reinertsen, Erik; Shashikumar, Supreeth P; Shah, Amit J; Nemati, Shamim; Clifford, Gari D K01ES025445 Physiol Meas (2018 10 30) 30222594 Exiting the NIEHS site 2018 
Self-digitization chip for single-cell genotyping of cancer-related mutations.   Thompson, Alison M; Smith, Jordan L; Monroe, Luke D; Kreutz, Jason E; Schneider, Thomas; Fujimo ... K01ES026842 PLoS One (2018) 29718986 Exiting the NIEHS site 2018 
Early sepsis detection in critical care patients using multiscale blood pressure and heart rate dyna ...   Shashikumar, Supreeth P; Stanley, Matthew D; Sadiq, Ismail; Li, Qiao; Holder, Andre; Clifford, ... K01ES025445 J Electrocardiol (2017 Nov - Dec) 28916175 Exiting the NIEHS site 2017 
Heart rate-based window segmentation improves accuracy of classifying posttraumatic stress disorder ...   Reinertsen, Erik; Nemati, Shamim; Vest, Adriana N; Vaccarino, Viola; Lampert, Rachel; Shah, Am ... K01ES025445 Physiol Meas (2017 Jun) 28489609 Exiting the NIEHS site 2017 
Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis.   Smith, Catherine C; Paguirigan, Amy; Jeschke, Grace R; Lin, Kimberly C; Massi, Evan; Tarver, T ... K01ES026842 Blood (2017 07 06) 28490572 Exiting the NIEHS site 2017 
Multiscale network representation of physiological time series for early prediction of sepsis.   Shashikumar, Supreeth P; Li, Qiao; Clifford, Gari D; Nemati, Shamim K01ES025445 Physiol Meas (2017 Nov 30) 29091053 Exiting the NIEHS site 2017 
Resonance as the Mechanism of Daytime Periodic Breathing in Patients with Heart Failure.   Sands, Scott A; Mebrate, Yoseph; Edwards, Bradley A; Nemati, Shamim; Manisty, Charlotte H; Desa ... K01ES025445 Am J Respir Crit Care Med (2017 01 15) 27559818 Exiting the NIEHS site 2017 
Serial Daily Organ Failure Assessment Beyond ICU Day 5 Does Not Independently Add Precision to ICU R ...   Holder, Andre L; Overton, Elizabeth; Lyu, Peter; Kempker, Jordan A; Nemati, Shamim; Razmi, Fer ... K01ES025445 Crit Care Med (2017 Dec) 28906286 Exiting the NIEHS site 2017 
THE TRAINING OF NEXT GENERATION DATA SCIENTISTS IN BIOMEDICINE.   Garmire, Lana X; Gliske, Stephen; Nguyen, Quynh C; Chen, Jonathan H; Nemati, Shamim; VAN Horn, ... K01ES025445 Pac Symp Biocomput (2017) 27897014 Exiting the NIEHS site 2017 
A Model-based Machine Learning Approach to Probing Autonomic Regulation from Nonstationary Vital-Sig ...   Lehman, Li-Wei; Mark, Roger; Nemati, Shamim K01ES025445 IEEE J Biomed Health Inform (2016 Dec 07) 28114047 Exiting the NIEHS site 2016 
Discriminating clinical phases of recovery from major depressive disorder using the dynamics of faci ...   Harati, Sahar; Crowell, Andrea; Mayberg, Helen; Jun Kong; Nemati, Shamim K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2016 08) 28268777 Exiting the NIEHS site 2016 
Monitoring and detecting atrial fibrillation using wearable technology.   Nemati, Shamim; Ghassemi, Mohammad M; Ambai, Vaidehi; Isakadze, Nino; Levantsevych, Oleksiy; Sh ... K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2016 08) 28269032 Exiting the NIEHS site 2016 
Optimal medication dosing from suboptimal clinical examples: a deep reinforcement learning approach.   Nemati, Shamim; Ghassemi, Mohammad M; Clifford, Gari D K01ES025445 Conf Proc IEEE Eng Med Biol Soc (2016 08) 28268938 Exiting the NIEHS site 2016 
Semisupervised ECG Ventricular Beat Classification With Novelty Detection Based on Switching Kalman ...   Oster, Julien; Behar, Joachim; Sayadi, Omid; Nemati, Shamim; Johnson, Alistair E W; Clifford, ... K01ES025445 IEEE Trans Biomed Eng (2015 Sep) 25680203 Exiting the NIEHS site 2015 
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