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Your Environment. Your Health.

Person Details: Muhammad G. Kibriya

Superfund Research Program

Muhammad G. Kibriya

University of Chicago
924 E. 57th Street
Knapp Bldg R110
Chicago, Illinois 60637-0000
Phone: 773-834-9737
Email: kibriya@uchicago.edu

Projects

Publications

2019

  • Byrd D, Chen J, Vogtmann E, Hullings A, Song S, Amir A, Kibriya MG, Ahsan H, Chen Y, Nelson H, Knight R, Shi J, Chia N, Sinha R. 2019. Reproducibility, stability, and accuracy of microbial profiles by fecal sample collection method in three distinct populations. PLoS One doi:10.1371/journal.pone.0224757 PMID:31738775 PMCID:PMC6860998
  • Chen Q, Shen S, Sun H, Wu F, Kluz T, Kibriya MG, Chen Y, Ahsan H, Costa M. 2019. PBMC gene expression profiles of female Bangladeshi adults chronically exposed to arsenic-contaminated drinking water. Environ Pollut 259:113672. doi:10.1016/j.envpol.2019.113672 PMID:31918125
  • Nolan-Kennedy R, Wu F, Hu J, Yang L, Kelly D, Li H, Jasmine F, Kibriya MG, Parvez F, Shaheen I, Sarwar G, Ahmed A, Eunus M, Islam T, Pei Z, Ahsan H, Chen Y. 2019. The association between smoking and gut microbiome in Bangladesh. Nicotine Tob Res doi:10.1093/ntr/ntz220 PMID:31794002 (ahead of print)
  • Osborne G, Wu F, Yang L, Kelly D, Hu J, Li H, Jasmine F, Kibriya MG, Parvez F, Shaheen I, Sarwar G, Ahmed A, Eunus M, Islam T, Pei Z, Ahsan H, Chen Y. 2019. The association between gut microbiome and anthropometric measurements in Bangladesh. Gut Microbes 11(1):63-76. doi:10.1080/19490976.2019.1614394 PMID:31138061 PMCID:PMC6973329
  • Pierce BL, Tong L, Dean S, Argos M, Jasmine F, Rakibuz-Zaman M, Sarwar G, Islam M, Shahriar H, Islam T, Rahman M, Yunus M, Lynch VJ, Oglesbee D, Graziano JH, Kibriya MG, Gamble MV, Ahsan H. 2019. A missense variant in FTCD is associated with arsenic metabolism and toxicity phenotypes in Bangladesh. PLoS Genet 15:18. doi:10.1371/journal.pgen.1007984 PMID:30893314 PMCID:PMC6443193
  • Vogtmann E, Chen J, Kibriya MG, Amir A, Shi J, Chen Y, Islam M, Eunes M, Ahmed A, Naher J, Rahman A, Barmon B, Knight R, Chia N, Ahsan H, Abnet CC, Sinha R. 2019. Comparison of oral collection methods for studies of microbiota. Cancer Epidemiol Biomarkers Prev 28:137-143. doi:10.1158/1055-9965.EPI-18-0312 PMID:30262598 PMCID:PMC6324947
  • Wu F, Yang L, Islam M, Jasmine F, Kibriya MG, Nahar J, Barmon B, Parvez F, Sarwar G, Ahmed A, Eunus M, Islam T, Slavkovich VN, Hu J, Li H, Graziano JH, Pei Z, Ahsan H, Chen Y. 2019. The role of gut microbiome and its interaction with arsenic exposure in carotid intima-media thickness in a Bangladesh population. Environ Int 123:104-113. doi:10.1016/j.envint.2018.11.049 PMID:30503971 PMCID:PMC6371773

2018

  • Argos M, Tong L, Roy S, Sabarinathan M, Ahmed A, Islam M, Rakibuz-Zaman M, Sarwar G, Shahriar H, Rahman M, Yunus M, Graziano JH, Jasmine F, Kibriya MG, Zhou X, Ahsan H, Pierce BL. 2018. Screening for gene-environment (GxE) interaction using omics data from exposed individuals: an application to gene-arsenic interaction. Mamm Genome 29:109-111. doi:10.1007/s00335-018-9737-8 PMID:29453499
  • Delgado DA, Zhang C, Chen LS, Gao J, Roy S, Shinkle J, Sabarinathan M, Argos M, Tong L, Ahmed A, Islam T, Rakibuz-Zaman M, Sarwar G, Shahriar H, Rahman M, Yunus M, Jasmine F, Kibriya MG, Ahsan H, Pierce BL. 2018. Genome-wide association study of telomere length among South Asians identifies a second RTEL1 association signal. J Med Genet 55:64-71. doi:10.1136/jmedgenet-2017-104922 PMID:29151059
  • Delgado DA, Zhang C, Gleason K, Demanelis K, Chen LS, Gao J, Roy S, Shinkle J, Sabarinathan M, Argos M, Tong L, Ahmed A, Islam M, Rakibuz-Zaman M, Sarwar G, Shahriar H, Rahman M, Yunus M, Doherty JA, Jasmine F, Kibriya MG, Ahsan H, Pierce BL. 2018. The contribution of parent-to-offspring transmission of telomeres to the heritability of telomere length in humans. Hum Genet 1-12. doi:10.1007/s00439-018-1964-2 PMID:30536049
  • Niedzwiecki M, Liu X, Zhu H, Hall MN, Slavkovich VN, Ilievski V, Levy D, Siddique AB, Kibriya MG, Parvez F, Islam T, Ahmed A, Navas-Acien A, Graziano JH, Finnell RH, Ahsan H, Gamble MV. 2018. Serum homocysteine, arsenic methylation, and arsenic-induced skin lesion incidence in Bangladesh: A one-carbon metabolism candidate gene study. Environ Int 113:133-142. doi:10.1016/j.envint.2018.01.015 PMID:29421402 PMCID:PMC5873983
  • Pierce BL, Tong L, Argos M, Demanelis K, Jasmine F, Rakibuz-Zaman M, Sarwar G, Islam M, Shahriar H, Islam T, Rahman M, Yunus M, Kibriya MG, Chen LS, Ahsan H. 2018. Co-occurring expression and methylation QTLs allow detection of common causal variants and shared biological mechanisms. Nat Commun 9:doi:10.1038/s41467-018-03209-9 PMID:29476079 PMCID:PMC5824840
  • Zhang C, Kibriya MG, Jasmine F, Roy S, Gao J, Sabarinathan M, Shinkle J, Delgado DA, Ahmed A, Islam T, Eunus M, Islam M, Hasan R, Graziano JH, Ahsan H, Pierce BL. 2018. A study of telomere length, arsenic exposure, and arsenic toxicity in a Bangladeshi cohort. Environ Res 164:346-355. doi:10.1016/j.envres.2018.03.005 PMID:29567420

2017

  • Dean S, Zhang C, Gao J, Roy S, Shinkle J, Sabarinathan M, Argos M, Tong L, Ahmed A, Islam MT, Islam T, Rakibuz-Zaman M, Sarwar G, Shahriar H, Rahman M, Yunus M, Graziano JH, Chen LS, Jasmine F, Kibriya MG, Ahsan H, Pierce BL. 2017. The association between telomere length and mortality in Bangladesh. Aging-US 9(6):1537-1551. doi:10.18632/aging.101246 PMID:28630379 PMCID:PMC5509454
  • Kibriya MG, Jasmine F, Parvez F, Argos M, Roy S, Paul-Brutus R, Islam T, Ahmed A, Rakibuz-Zaman M, Shinkle J, Slavkovich VN, Graziano JH, Ahsan H. 2017. Association between genome-wide copy number variation and arsenic-induced skin lesions: a prospective study. Environ Health 16:75. doi:10.1186/s12940-017-0283-8 PMID:28720099 PMCID:PMC5516382
  • Vogtmann E, Chen J, Kibriya MG, Chen Y, Islam T, Eunes M, Ahmed A, Naher J, Rahman A, Amir A, Shi J, Abnet CC, Nelson H, Knight R, Chia N, Ahsan H, Sinha R. 2017. Comparison of fecal collection methods for microbiota studies in Bangladesh. Appl Environ Microbiol 83(10):e00361-17. doi:10.1128/aem.00361-17 PMID:28258145 PMCID:PMC5411505

2015

  • Argos M, Chen LS, Jasmine F, Tong L, Pierce BL, Roy S, Paul-Brutus R, Gamble MV, Harper KN, Parvez F, Rahman M, Rakibuz-Zaman M, Slavkovich VN, Baron JA, Graziano JH, Kibriya MG, Ahsan H. 2015. Gene-specific differential DNA methylation and chronic arsenic exposure in an epigenome-wide association study of adults in Bangladesh. Environ Health Perspect 123(1):64-71. doi:10.1289/ehp.1307884 PMID:25325195 PMCID:PMC4286273
  • Aschebrook-Kilfoy B, Argos M, Pierce BL, Tong L, Jasmine F, Roy S, Parvez F, Ahmed A, Islam T, Kibriya MG. 2015. Genome-wide association study of parity in Bangladeshi women. PLoS One 10(3):e0118488. doi:10.1371/journal.pone.0118488 PMID:25742292 PMCID:PMC4350917
  • Farzan S, Karagas MR, Jiang JY, Wu F, Liu M, Newman JD, Jasmine F, Kibriya MG, Paul-Brutus R, Parvez F, Argos M, Eunus M, Ahmed A, Rakibuz-Zaman M, Hasan R, Sarwar G, Slavkovich VN, Graziano JH, Ahsan H, Chen Y, Scannell Bryan M, Islam T. 2015. Gene-arsenic interaction in longitudinal changes of blood pressure: findings from the Health Effects of Arsenic Longitudinal Study (HEALS) in Bangladesh. Toxicol Appl Pharmacol 288(1):95-105. doi:10.1016/j.taap.2015.07.017 PMID:26220686 PMCID:PMC4606937
  • Gao J, Tong L, Argos M, Ahmed A, Rakibuz-Zaman M, Kibriya MG, Jasmine F, Slavkovich VN, Graziano JH, Ahsan H, Pierce BL, Scannell Bryan M. 2015. The genetic architecture of arsenic metabolism efficiency: a SNP-based heritability study of Bangladeshi adults. Environ Health Perspect 123(10):985-992. doi:10.1289/ehp.1408909 PMID:25768001 PMCID:PMC4590755
  • Kato N, Loh M, Takeuchi F, Verweij N, Wang X, Zhang W, Kelly TN, Saleheen D, Lehne B, Leach IM, Drong AW, Abbott J, Wahl S, Tan S, Scott WR, Campanella G, Chadeau-Hyam M, Afzal U, Ahluwalia TS, Bonder M, Chen P, Dehghan A, Edwards TL, Esko T, Go M, Harris SE, Hartiala J, Kasela S, Kasturiratne A, Khor C, Kleber ME, Li H, Mok ZY, Nakatochi M, Sapari N, Saxena R, Stewart AF, Stolk L, Tabara Y, Teh A, Wu Y, Wu J, Zhang Y, Aits I, Da Silva Couto Alves A, Das S, Dorajoo R, Hopewell JC, Kim Y, Koivula RW, Luan J, Lyytikainen L, Nguyen QN, Pereira MA, Postmus I, Raitakari OT, Scannell Bryan M, Scott RA, Sorice R, Tragante V, Traglia M, White J, Yamamoto K, Zhang Y, Adair LS, Ahmed A, Akiyama K, Asif R, Aung T, Barroso I, Bjonnes A, Braun TR, Cai H, Chang L, Chen C, Cheng C, Chong Y, Collins R, Courtney R, Davies G, Delgado G, Do LD, Doevendans PA, Gansevoort RT, Gao Y, Grammer TB, Grarup N, Grewal J, Gu D, Wander GS, Hartikainen A, Hazen SL, He J, Heng C, Hixson JE, Hofman A, Hsu C, Huang W, Husemoen LL, Hwang J, Ichihara S, Igase M, Isono M, Justesen JM, Katsuya T, Kim Y, Kishimoto M, Koh W, Kohara K, Kumari M, Kwek K, Lee NR, Lee J, Liao J, Lieb W, Liewald DC, Matsubara T, Matsushita Y, Meitinger T, Mihailov E, Milani L, Mills R, Mononen N, Muller-Nurasyid M, Nabika T, Nakashima E, Ng HK, Nikus K, Nutile T, Ohkubo T, Ohnaka K, Parish S, Paternoster L, Peng H, Peters A, Pham ST, Pinidiyapathirage MJ, Rahman M, Rakugi H, Rolandsson O, Rozario MA, Ruggiero D, Sala CF, Sarju R, Shimokawa K, Snieder H, Sparso T, Spiering W, Starr JM, Stott DJ, Stram DO, Sugiyama T, Szymczak S, Tang W, Tong L, Trompet S, Turjanmaa V, Ueshima H, Uitterlinden AG, Umemura S, Vaarasmaki M, van Dam RM, van Gilst WH, van Veldhuisen DJ, Viikari JS, Waldenberger M, Wang Y, Wang A, Wilson R, Wong T, Xiang Y, Yamaguchi S, Ye X, Young RD, Young TL, Yuan J, Zhou X, Asselbergs FW, Ciullo M, Clarke R, Deloukas P, Franke A, Franks PW, Franks S, Friedlander Y, Gross MD, Guo Z, Hansen T, Jarvelin M, Jorgensen T, Jukema J, Kahonen M, Kajio H, Kivimaki M, Lee J, Lehtimaki T, Linneberg A, Miki T, Pedersen O, Samani NJ, Sorensen TI, Takayanagi R, Toniolo D, BIOS-Consortium, CARDIo GRAMplusCD, LifeLines Cohort Study, The InterAct Consortium, Ahsan H, Allayee H, Chen Y, Danesh J, Deary IJ, Franco OH, Franke L, Heijman BT, Holbrook JD, Isaacs A, Kim B, Lin X, Liu J, Marz W, Metspalu A, Mohlke KL, Sanghera DK, Shu X, van Meurs JB, Vithana E, Wickremasinghe AR, Wijmenga C, Wolffenbuttel BH, Yokota M, Zheng W, Zhu D, Vineis P, Kyrtopoulos SA, Kleinjans JC, McCarthy M, Soong R, Gieger C, Scott J, Teo Y, He J, Elliott P, Tai E, van der Harst P, Kooner JS, Chambers JC, Kibriya MG. 2015. Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation. Nat Genet 47(11):1282-1293. PMID:26390057
  • Seow W, Pan W, Kile ML, Tong L, Baccarelli A, Quamruzzaman Q, Rahman M, Mostofa G, Rakibuz-Zaman M, Ahsan H, Lin X, Christiani DC, Kibriya MG. 2015. A distinct and replicable variant of the squamous cell carcinoma gene inositol polyphosphate-5-phosphatase modifies the susceptibility of arsenic-associated skin lesions in Bangladesh. Cancer 121(13):2222-2229. doi:10.1002/cncr.29291 PMID:25759212 PMCID:PMC4565788
  • Wu F, Jasmine F, Kibriya MG, Liu M, Cheng X, Parvez F, Islam T, Ahmed A, Rakibuz-Zaman M, Jiang JY, Roy S, Paul-Brutus R, Slavkovich VN, Levy D, VanderWeele TJ, Pierce BL, Graziano JH, Ahsan H, Chen Y. 2015. Interaction between arsenic exposure from drinking water and genetic polymorphisms on cardiovascular disease in Bangladesh: a prospective case-cohort study. Environ Health Perspect 123(5):451-457. doi:10.1289/ehp.1307883 PMID:25575156 PMCID:PMC4421763

2014

  • Argos M, Tong L, Pierce BL, Rakibuz-Zaman M, Ahmed A, Islam T, Rahman M, Paul-Brutus R, Rahaman R, Roy S, Jasmine F, Kibriya MG, Ahsan H. 2014. Genome-wide association study of smoking behaviours among Bangladeshi adults. J Med Genet 51(5):327-333. doi:10.1136/jmedgenet-2013-102151 PMID:24665060 PMCID:PMC4126189
  • Pierce BL, Tong L, Chen LS, Rahaman R, Argos M, Jasmine F, Roy S, Paul-Brutus R, Westra H, Franke L, Esko T, Zaman R, Islam T, Rahman M, Baron JA, Kibriya MG, Ahsan H. 2014. Mediation analysis demonstrates that trans-eQTLs are often explained by cis-mediation: a genome-wide analysis among 1,800 South Asians. PLoS Genet 10(12):e1004818. doi:10.1371/journal.pgen.1004818 PMID:25474530 PMCID:PMC4256471
  • Scannell Bryan M, Argos M, Pierce BL, Tong L, Rakibuz-Zaman M, Ahmed A, Rahman M, Islam T, Yunus M, Parvez F, Jasmine F, Baron JA, Kibriya MG, Ahsan H. 2014. Genome-wide association studies and heritability estimates of body mass index related phenotypes in Bangladeshi adults. PLoS One 9(8):e105062. doi:10.1371/journal.pone.0105062 PMID:25133637 PMCID:PMC4136799
  • Wu F, Jasmine F, Kibriya MG, Liu M, Cheng X, Parvez F, Paul-Brutus R, Islam T, Paul RR, Sarwar G, Ahmed A, Jiang JY, Slavkovich VN, Rundek T, Demmer RT, Desvarieux M, Ahsan H, Chen Y. 2014. Interaction between arsenic exposure from drinking water and genetic susceptibility in carotid intima-media thickness in Bangladesh. Toxicol Appl Pharmacol 276(3):195-203. doi:10.1016/j.taap.2014.02.014 PMID:24593923 PMCID:PMC4080412

2013

  • Argos M, Rahman M, Parvez F, Dignam J, Islam T, Quasem I, Hore SK, Haider AT, Hossain Z, Patwary T, Rakibuz-Zaman M, Sarwar G, La Porte P, Harjes J, Anton K, Kibriya MG, Jasmine F, Khan R, Kamal M, Shea CR, Yunus M, Baron JA, Ahsan H. 2013. Baseline comorbidities in a skin cancer prevention trial in Bangladesh. Eur J Clin Invest 43(6):579-588. doi:10.1111/eci.12085 PMID:23590571 PMCID:PMC3953314

2012

  • Pierce BL, Kibriya MG, Tong L, Jasmine F, Argos M, Roy S, Paul-Brutus R, Rahaman R, Rakibuz-Zaman M, Parvez F, Ahmed A, Quasem I, Hore SK, Alam S, Islam T, Slavkovich VN, Gamble MV, Yunus M, Rahman M, Baron JA, Graziano JH, Ahsan H. 2012. Genome-wide association study identifies chromosome 10q24.32 variants associated with arsenic metabolism and toxicity phenotypes in Bangladesh. PLoS Genet 8(2):e1002522. doi:10.1371/journal.pgen.1002522 PMID:22383894 PMCID:PMC3285587
  • Wu F, Jasmine F, Kibriya MG, Liu M, Wojcik O, Parvez F, Rahaman R, Roy S, Paul-Brutus R, Segers S, Slavkovich VN, Islam T, Levy D, Mey JL, van Geen AF, Graziano JH, Ahsan H, Chen Y. 2012. Association between arsenic exposure from drinking water and plasma levels of cardiovascular markers. Am J Epidemiol 175(12):1252-1261. doi:10.1093/aje/kwr464 PMID:22534204 PMCID:PMC3372314

2011

2010

  • Kibriya MG, Jasmine F, Roy S, Paul-Brutus R, Argos M, Ahsan H. 2010. Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: An illustration with breast cancer tissues. BMC Genomics 11:622. doi:10.1186/1471-2164-11-622 PMID:21059268 PMCID:PMC3091761

2009

  • Partridge MA, Huang SX, Ahsan H, Davidson MM, Hei TK, Kibriya MG. 2009. Environmental mutagens induced transversions but not transitions in regulatory region of mitochondrial DNA. J Toxicol Environ Health A 72(5):301-304. doi:10.1080/15287390802526381 PMID:19184745

2007

  • Chen Y, Santella RM, Kibriya MG, Wang Q, Kappil M, Verret WJ, Graziano JH, Ahsan H. 2007. Association between arsenic exposure from drinking water and plasma levels of soluble cell adhesion molecules. Environ Health Perspect 115(10):1415-1420. doi:10.1289/ehp.10277 PMID:17938729 PMCID:PMC2022642
  • Greenlee H, Chen Y, Kabat GC, Wang Q, Gurvich I, Sepkovic DW, Bradlow H, Senie RT, Santella RM, Ahsan H, Kibriya MG. 2007. Variants in estrogen metabolism and biosynthesis genes and urinary estrogen metabolites in women with a family history of breast cancer. Breast Cancer Res Treat 102(1):111-117. doi:10.1007/s10549-006-9308-7 PMID:16850246
  • Kibriya MG, Jasmine F, Argos M, Verret WJ, Rakibuz-Zaman M, Ahmed A, Parvez F, Ahsan H. 2007. Changes in gene expression profiles in response to selenium supplementation among individuals with arsenic-induced pre-malignant skin lesions. Toxicol Lett 169(2):162-176. doi:10.1016/j.toxlet.2007.01.006 PMID:17293063 PMCID:PMC1924917

2006

  • Argos M, Kibriya MG, Parvez F, Jasmine F, Rakibuz-Zaman M, Ahsan H. 2006. Gene expression profiles in peripheral lymphocytes by arsenic exposure and skin lesion status in a Bangladeshi population. Cancer Epidemiol Biomarkers Prev 15(7):1367-1375. doi:10.1158/1055-9965.EPI-06-0106 PMID:16835338

2005

  • Verret WJ, Chen Y, Ahmed A, Islam T, Parvez F, Graziano JH, Ahsan H, Kibriya MG. 2005. A randomized, double-blind placebo-controlled trial evaluating the effects of vitamin E and selenium on arsenic-induced skin lesions in Bangladesh. J Occup Environ Med 47(10):1026-1035. PMID:16217243

2003

  • Ahsan H, Chen Y, Kibriya MG, Islam MN, Slavkovich VN, Graziano JH, Santella RM. 2003. Susceptibility to arsenic-induced hyperkeratosis and oxidative stress genes myeloperoxidase and catalase. Cancer Lett 201(1):57-65. PMID:14580687
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