Superfund Research Program

Data Management and Analysis Core

Project Leader: Kelly G. Pennell
Co-Investigators: Erin Haynes, Hunter Nathaniel Moseley
Grant Number: P42ES007380
Funding Period: 2020-2025

Project-Specific Links

Publications

2023

• Huckvale ED, Powell CD, Jin H, Moseley HN. 2023. Benchmark dataset for training machine learning models to predict the pathway involvement of metabolites. Metabolites 13(11):1120. doi:10.3390/metabo13111120 PMID:37999216 PMCID:PMC10673125
• Martin KV, Hilbert TJ, Reilly M, Christian WJ, Hoover AG, Pennell KG, Ding QX, Haynes E. 2023. PFAS soil concentrations surrounding a hazardous waste incinerator in East Liverpool, Ohio, an environmental justice community. Environ Sci Pollut Res Int doi:10.1007/s11356-023-27880-8 PMID:37300732
• Nault R, Cave MC, Ludewig G, Moseley HN, Pennell KG, Zacharewski TR. 2023. A case for accelerating standards to achieve the FAIR principles of environmental health research experimental data. Environ Health Perspect 131(6):65001. doi:10.1289/EHP11484 PMID:37352010 PMCID:PMC10289218
• Ojha S, Thompson PT, Powell CD, Moseley HN, Pennell KG. 2023. Identifying and sharing per-and polyfluoroalkyl substances hot-spot areas and exposures in drinking water. Sci Data 10(1):388. doi:10.1038/s41597-023-02277-x PMID:37328532 PMCID:PMC10275912
• Powell CD, Moseley HN. 2023. The metabolomics workbench file status website: a metadata repository promoting FAIR principles of metabolomics data. BMC Bioinformatics 24(1):299. doi:10.1186/s12859-023-05423-9 PMID:37482620 PMCID:PMC10364356
• Thompson PT, Moseley HN. 2023. MESSES: Software for transforming messy research datasets into clean submissions to metabolomics workbench for public sharing. Metabolites 13(7):842. doi:10.3390/metabo13070842 PMID:37512549 PMCID:PMC10386444
• Thompson PT, Ojha S, Powell CD, Pennell KG, Moseley HN. 2023. A proposed FAIR approach for disseminating geospatial information system maps. Sci Data 10(1):389. doi:10.1038/s41597-023-02281-1 PMID:37328607 PMCID:PMC10275873

2022

• Ojha S, Thompson PT, Powell CD, Moseley HN, Pennell KG. 2022. A FAIR approach for detecting and sharing PFAS hot-spot areas and water systems. ChemRxiv doi:10.26434/chemrxiv-2022-bt3f6
• Thompson PT, Powell CD, Moseley HN. 2022. Academic tracker: software for tracking and reporting publications associated with authors and grants. PLoS One 17(11):e0277834. doi:10.1371/journal.pone.0277834 PMID:36399468 PMCID:PMC9674155

2021

• Deng P, Valentino, T, Flythe MD, Moseley HN, Leachman J, Morris AJ, Hennig B. 2021. Untargeted stable isotope probing of the gut microbiota metabolome using (13)C-labeled dietary fibers. J Proteome Res 20:doi:10.1021/acs.jproteome.1c00124 PMID:33830777
• Powell CD, Moseley HN. 2021. The mwtab python library for RESTful Access and enhanced quality control, deposition, and curation of the metabolomics workbench data repository. Metabolites 11(3):doi:10.3390/metabo11030163 PMID:33808985 PMCID:PMC8000456