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Dataset Details

Superfund Research Program

Title: NimbleGen Daphnia pulex Whole-genome Tiling Array Set (1 of 2)

Accession Number: gpl11200

Link to Dataset: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gpl11200

Repository: Gene Expression Omnibus (GEO)

Data Type(s): Gene Expression

Organism(s): Daphnia pulex

Summary: This is a Daphnia pulex whole-genome tiling array set (1 of 2) in HD2 1-plex format with 2.1M probes, manufactured by Roche NimbleGen. Daphnia pulex annotated draft genome assembly GenBank accession number: ACJG00000000.

Publication(s) associated with this dataset:
  • Pfrender ME, Gilbert D, Thomas W, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Caceres CE, Carmel L, Casola C, Choi J, Detter JC, Dong Q, Dusheyko S, Eads BD, Frohlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak J, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL, Colbourne JK. 2011. The ecoresponsive genome of Daphnia pulex. Science 331(6017):555-561. doi:10.1126/science.1197761 PMID:21292972 PMCID:PMC3529199
Project(s) associated with this dataset:
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